BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1810.1
(246 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45040.1 | Cytochrome c | Chr5:18175566-18176851 REVERSE LENG... 178 3e-56
>AT5G45040.1 | Cytochrome c | Chr5:18175566-18176851 REVERSE
LENGTH=175 | 201606
Length = 175
Score = 178 bits (451), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 98/117 (83%), Gaps = 3/117 (2%)
Query: 127 LIALSPLCYPSVSYGEISSNGPQRSGASLFHKACIGCHYGGGNIVQPGSTLFLKDLQRNG 186
L+A+SP+C+P S G+ + GA+LF++ACIGCH GGNI+QPG+TLF KDL+RNG
Sbjct: 56 LLAVSPICFPPESLGQTLD---IQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNG 112
Query: 187 VDSEEEIYKITYYGKGRMPGFGEKCTPRGQCTFGERLQDEDIQLLAEYIKQQSALDW 243
VD+EEEIY++TY+GKGRMPGFGEKCTPRGQCTFG RLQDE+I+LLAE++K Q+ W
Sbjct: 113 VDTEEEIYRVTYFGKGRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGW 169