BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1880.1
(211 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17710.3 | Co-chaperone GrpE family protein | Chr5:5839560-58... 177 7e-55
AT5G17710.1 | Co-chaperone GrpE family protein | Chr5:5839560-58... 177 7e-55
AT5G17710.2 | Co-chaperone GrpE family protein | Chr5:5839560-58... 177 8e-55
AT1G36390.2 | Co-chaperone GrpE family protein | Chr1:13701811-1... 120 6e-33
AT1G36390.1 | Co-chaperone GrpE family protein | Chr1:13701811-1... 120 6e-33
>AT5G17710.3 | Co-chaperone GrpE family protein |
Chr5:5839560-5841639 REVERSE LENGTH=324 | 201606
Length = 324
Score = 177 bits (450), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 126/169 (74%), Gaps = 1/169 (0%)
Query: 41 LELYKEALASNNEPKIAEMEIFFRSLEEDKNYLAIKLASLSKELSLQRDHRFRIRADLNN 100
L+ YKEALA NNE KIAE+E +S+E++K LA K+ASLS ELS++RD RI AD +N
Sbjct: 114 LKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDN 173
Query: 101 FRSRTERDRLSLVTDVRREVVLSLLPVLDNFERAKSEINVKTKGETKINNSYQSIFKQFV 160
FR RTER+RL+LV++ + EVV +LL VLDNFERAKS+I V+T+GE K+ NSYQSI+KQFV
Sbjct: 174 FRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQSIYKQFV 233
Query: 161 EILGSLSVVTVDTAGNPFDPIAQYRVGSKLNPVLEQLIQVLKRVRSGFM 209
EILGSL V+ V+T G FDP+ + + + E+ I VL+ R GF+
Sbjct: 234 EILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGI-VLEEYRKGFL 281
>AT5G17710.1 | Co-chaperone GrpE family protein |
Chr5:5839560-5841639 REVERSE LENGTH=324 | 201606
Length = 324
Score = 177 bits (450), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 126/169 (74%), Gaps = 1/169 (0%)
Query: 41 LELYKEALASNNEPKIAEMEIFFRSLEEDKNYLAIKLASLSKELSLQRDHRFRIRADLNN 100
L+ YKEALA NNE KIAE+E +S+E++K LA K+ASLS ELS++RD RI AD +N
Sbjct: 114 LKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDN 173
Query: 101 FRSRTERDRLSLVTDVRREVVLSLLPVLDNFERAKSEINVKTKGETKINNSYQSIFKQFV 160
FR RTER+RL+LV++ + EVV +LL VLDNFERAKS+I V+T+GE K+ NSYQSI+KQFV
Sbjct: 174 FRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQSIYKQFV 233
Query: 161 EILGSLSVVTVDTAGNPFDPIAQYRVGSKLNPVLEQLIQVLKRVRSGFM 209
EILGSL V+ V+T G FDP+ + + + E+ I VL+ R GF+
Sbjct: 234 EILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGI-VLEEYRKGFL 281
>AT5G17710.2 | Co-chaperone GrpE family protein |
Chr5:5839560-5841639 REVERSE LENGTH=326 | 201606
Length = 326
Score = 177 bits (450), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 126/169 (74%), Gaps = 1/169 (0%)
Query: 41 LELYKEALASNNEPKIAEMEIFFRSLEEDKNYLAIKLASLSKELSLQRDHRFRIRADLNN 100
L+ YKEALA NNE KIAE+E +S+E++K LA K+ASLS ELS++RD RI AD +N
Sbjct: 116 LKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDN 175
Query: 101 FRSRTERDRLSLVTDVRREVVLSLLPVLDNFERAKSEINVKTKGETKINNSYQSIFKQFV 160
FR RTER+RL+LV++ + EVV +LL VLDNFERAKS+I V+T+GE K+ NSYQSI+KQFV
Sbjct: 176 FRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQSIYKQFV 235
Query: 161 EILGSLSVVTVDTAGNPFDPIAQYRVGSKLNPVLEQLIQVLKRVRSGFM 209
EILGSL V+ V+T G FDP+ + + + E+ I VL+ R GF+
Sbjct: 236 EILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGI-VLEEYRKGFL 283
>AT1G36390.2 | Co-chaperone GrpE family protein |
Chr1:13701811-13703524 REVERSE LENGTH=279 | 201606
Length = 279
Score = 120 bits (300), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 96/138 (69%)
Query: 44 YKEALASNNEPKIAEMEIFFRSLEEDKNYLAIKLASLSKELSLQRDHRFRIRADLNNFRS 103
YK+AL + +E + E+E F +E++KN + K+ SLS +++ +++ + R++AD +N R
Sbjct: 82 YKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLSMKIASEKEMKIRLQADFDNTRK 141
Query: 104 RTERDRLSLVTDVRREVVLSLLPVLDNFERAKSEINVKTKGETKINNSYQSIFKQFVEIL 163
+ ++DRLS ++ + +++ SLLP++D+FE+AK ++ V T E KI+ SYQ I++QFVE+L
Sbjct: 142 KLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKEKKIDTSYQGIYRQFVEVL 201
Query: 164 GSLSVVTVDTAGNPFDPI 181
L V + T G PFDP+
Sbjct: 202 RYLRVSVIATVGKPFDPL 219
>AT1G36390.1 | Co-chaperone GrpE family protein |
Chr1:13701811-13703524 REVERSE LENGTH=279 | 201606
Length = 279
Score = 120 bits (300), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 96/138 (69%)
Query: 44 YKEALASNNEPKIAEMEIFFRSLEEDKNYLAIKLASLSKELSLQRDHRFRIRADLNNFRS 103
YK+AL + +E + E+E F +E++KN + K+ SLS +++ +++ + R++AD +N R
Sbjct: 82 YKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLSMKIASEKEMKIRLQADFDNTRK 141
Query: 104 RTERDRLSLVTDVRREVVLSLLPVLDNFERAKSEINVKTKGETKINNSYQSIFKQFVEIL 163
+ ++DRLS ++ + +++ SLLP++D+FE+AK ++ V T E KI+ SYQ I++QFVE+L
Sbjct: 142 KLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKEKKIDTSYQGIYRQFVEVL 201
Query: 164 GSLSVVTVDTAGNPFDPI 181
L V + T G PFDP+
Sbjct: 202 RYLRVSVIATVGKPFDPL 219