BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g1890.1
         (202 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G09775.1 | non-LTR retroelement reverse transcriptase | Chr4:...    49   2e-07
AT2G13980.1 | Polynucleotidyl transferase%2C ribonuclease H-like...    49   3e-07

>AT4G09775.1 | non-LTR retroelement reverse transcriptase |
           Chr4:6156629-6157054 FORWARD LENGTH=141 | 201606
          Length = 141

 Score = 48.9 bits (115), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 13/96 (13%)

Query: 4   PDNNSPGEGKSWTPPGPNELKINFDAGYVDRRADIAAVC---RNSKGEFVMALVHSTSAT 60
           P++   G  K W+PP    LK NFD+GYV  R D  + C   R+S G     ++HS  A 
Sbjct: 51  PNDRPSGRSKEWSPPPEGYLKCNFDSGYVQGR-DYTSTCWIIRDSNGH----VIHSGCAK 105

Query: 61  L-----ALEAEAKAALLAMKIATDLNQYICIIEGDS 91
           L     AL+AEA   L A+++           EG++
Sbjct: 106 LQQSYSALQAEALGFLHALQMVWIRGYRYVWFEGEN 141


>AT2G13980.1 | Polynucleotidyl transferase%2C ribonuclease H-like
           superfamily protein | Chr2:5869853-5870368 REVERSE
           LENGTH=171 | 201606
          Length = 171

 Score = 49.3 bits (116), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 16/165 (9%)

Query: 15  WTPPGPNELKINFDAGYVDRRADIAA--VCRNSKG--EFVMALVHSTSATLALEAEAKAA 70
           W  P    +K N+DAG+  +  D  A  + RN  G  +   +L    ++T  LEAE KA 
Sbjct: 13  WKAPPDTHIKCNYDAGFNVQNLDSTARWIIRNHDGIAQHWGSLQLDNTST-PLEAETKAL 71

Query: 71  LLAMKIATDLNQYI-CIIEGDS---INVVKACSSSEEDIPWKIRSTIIDIKNSKRNLTEC 126
           L A++  T +  Y+  I+EGD     N+V   SS        + + + DI+   +  +  
Sbjct: 72  LAALQ-QTWIRGYLRVIMEGDCETLTNLVSGSSSHNH-----LANLLDDIRIWAKKFSNV 125

Query: 127 YFSFCPRNAIKVAHLLAHLNRRNNLNTPSEMVIVPECIHKYIPDD 171
            FSF  R   KVAH LA L   N+    S+   +P  +H++  +D
Sbjct: 126 QFSFVRRGGNKVAHELAKLG-CNSTCFYSDSCTLPIWLHQHYCND 169


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