BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1920.1
(386 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56900.1 | Transducin/WD40 repeat-like superfamily protein | ... 436 e-151
>AT3G56900.1 | Transducin/WD40 repeat-like superfamily protein |
Chr3:21066330-21069343 FORWARD LENGTH=447 | 201606
Length = 447
Score = 436 bits (1120), Expect = e-151, Method: Compositional matrix adjust.
Identities = 224/396 (56%), Positives = 281/396 (70%), Gaps = 56/396 (14%)
Query: 1 MPSFPSPGTVTICEINRNLITAENLSEDGAKDTYGKILGVVFNPVPFQNG-SSILSNSEE 59
M SFP PG+VT+CEINR+LITA+NLS++ A++TYGK+LG+VF+PV F + SS+ N +
Sbjct: 1 MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDSTPSSLQENEGQ 60
Query: 60 ENVEREIVPPR-VTGGLLGKLNNSFKNQFFPSSNVNLLSEVDLQGLSWHQHKHLLAFISG 118
EN ++ + + L K+ +S K Q ++V LLSE+DLQG+SWHQ KH++AFISG
Sbjct: 61 ENGDKASGESKGLVATLQMKVADSLK-QILQPTDVTLLSEIDLQGVSWHQGKHIIAFISG 119
Query: 119 PNQVMIRDYEDTDSKDPFVLANDSQKDVKVLDWRPNGGKGLAVACKGGICIWSASYPGSA 178
NQV IRDYED D K+P +L +DSQ++VK L+WRPNGGK L++AC+GGICIW+ASYPG+
Sbjct: 120 ANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAASYPGNM 179
Query: 179 ASVRSGVASFVGTLSKGSGVRWTMVDFLRSPNNEQISALSWT-------SASHESSSFTI 231
A VRSG ++ G+LS+GSG RW +VDFLR N+EQISALSW+ SAS++SSSFTI
Sbjct: 180 ALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLASASYDSSSFTI 239
Query: 232 WDVAQGLGTPIRRGLGGISMLKWSPMGDYFFTAKLYGHSPIVNLLLLVSSSIHQLMWQSR 291
WDV+QG GTPIRRGLGGISMLKWSP GDYFF A+
Sbjct: 240 WDVSQGAGTPIRRGLGGISMLKWSPTGDYFFAARF------------------------- 274
Query: 292 SFHFDILTCICPLIMFFCSDGTFYLWETNTWTSEPW--SSSGGYVTGATWDPDGRMILLA 349
DGTF LWETNTWTSEPW SS G VTGA WDP+GR IL++
Sbjct: 275 -------------------DGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILIS 315
Query: 350 FSESLELGSIHFASRPPSLDAHLLPVDLPEVVSLTG 385
FS+S LGS+HF+S+PPSLDAHLLPV+LPE+ SLTG
Sbjct: 316 FSKSSTLGSVHFSSKPPSLDAHLLPVELPEIASLTG 351