BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2020.1
(437 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55270.1 | Galactose oxidase/kelch repeat superfamily protein... 707 0.0
AT1G55270.2 | Galactose oxidase/kelch repeat superfamily protein... 512 0.0
AT1G30090.1 | Galactose oxidase/kelch repeat superfamily protein... 130 1e-33
AT1G22040.1 | Galactose oxidase/kelch repeat superfamily protein... 131 2e-33
AT3G61350.2 | SKP1 interacting partner 4 | Chr3:22703203-2270437... 124 2e-31
>AT1G55270.1 | Galactose oxidase/kelch repeat superfamily protein |
Chr1:20618333-20619925 REVERSE LENGTH=434 | 201606
Length = 434
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/431 (77%), Positives = 376/431 (87%), Gaps = 5/431 (1%)
Query: 7 SSNSQRGIRVQAPLVDSVSCYCRVDSGFKTVAGARKFVPGSKLCMQPDIDPNAHKGKNSR 66
S N RG R+QAPLVDSVSCYCRVDSG KTV ARKFVPGSKLC+QPDI+PNAH+ KNS+
Sbjct: 9 SPNGSRGFRLQAPLVDSVSCYCRVDSGLKTVVEARKFVPGSKLCIQPDINPNAHRRKNSK 68
Query: 67 TARSRVQTPLLPGLPDDLAIACLVRVPRAEHRKLRLVCKKWYRLLAGNFFYSLRQNLGMS 126
R+R+Q PLLPGLPDDLA+ACL+RVPRAEHRKLRLVCK+WYRL +GNFFYS R+ LGMS
Sbjct: 69 RERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMS 128
Query: 127 EEWVYVIKRDRDGRLSWHAFDPAYQLWQPLPPVPLEYSEVLGFGCAVLSGFRLYLFGGKD 186
EEWVYV KRDRDG++SW+ FDP QLWQPLPPVP EYSE +GFGCAVLSG LYLFGGKD
Sbjct: 129 EEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKD 188
Query: 187 PLRGSMRRVIFYSARTNKWHRGPAMLRKRHFFGSCVINNCLYVAGGECEGAPRTLRSAEV 246
PLRGSMRRVIFY+ARTNKWHR P MLRKRHFFG CVINNCLYVAGGECEG RTLRSAEV
Sbjct: 189 PLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 248
Query: 247 YDPNKNKWSLISEMSTPMVPFIGVVYNGKWFLKGLGSHRQVMSEAYIPETNTWTPVTDGM 306
YDPNKN+WS I++MST MVP IGVVY+ KWFLKGLGSH+ VMSEAY PE N+W+PV+DGM
Sbjct: 249 YDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSEAYDPEVNSWSPVSDGM 308
Query: 307 VSGWRNPSISLNGNLYALDCRDGCKLRIYDEATDSWNKFIDSKLHLGTSRALEAAALVPL 366
V+GWRNP SLNG LY LDCRDGCKLR++DE+TDSWNKF+DSK HLG S++LEAAALVPL
Sbjct: 309 VAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALVPL 368
Query: 367 GGKLCIIRNNMTISLVDVSAPDKHVESNPGLWETIIERRGHFRSMLTTIWSSIAGRSGLK 426
KLCIIRNNM++SLVDVS PDK+ NP LWE I +G +S+L+ IWSSIAGR+ LK
Sbjct: 369 HNKLCIIRNNMSMSLVDVSNPDKN---NPRLWENIAV-KGQSKSILSNIWSSIAGRA-LK 423
Query: 427 SHIVHCQVLQA 437
SHIVHCQVLQA
Sbjct: 424 SHIVHCQVLQA 434
>AT1G55270.2 | Galactose oxidase/kelch repeat superfamily protein |
Chr1:20618333-20619259 REVERSE LENGTH=308 | 201606
Length = 308
Score = 512 bits (1318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 244/313 (77%), Positives = 272/313 (86%), Gaps = 5/313 (1%)
Query: 125 MSEEWVYVIKRDRDGRLSWHAFDPAYQLWQPLPPVPLEYSEVLGFGCAVLSGFRLYLFGG 184
MSEEWVYV KRDRDG++SW+ FDP QLWQPLPPVP EYSE +GFGCAVLSG LYLFGG
Sbjct: 1 MSEEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGG 60
Query: 185 KDPLRGSMRRVIFYSARTNKWHRGPAMLRKRHFFGSCVINNCLYVAGGECEGAPRTLRSA 244
KDPLRGSMRRVIFY+ARTNKWHR P MLRKRHFFG CVINNCLYVAGGECEG RTLRSA
Sbjct: 61 KDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSA 120
Query: 245 EVYDPNKNKWSLISEMSTPMVPFIGVVYNGKWFLKGLGSHRQVMSEAYIPETNTWTPVTD 304
EVYDPNKN+WS I++MST MVP IGVVY+ KWFLKGLGSH+ VMSEAY PE N+W+PV+D
Sbjct: 121 EVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSEAYDPEVNSWSPVSD 180
Query: 305 GMVSGWRNPSISLNGNLYALDCRDGCKLRIYDEATDSWNKFIDSKLHLGTSRALEAAALV 364
GMV+GWRNP SLNG LY LDCRDGCKLR++DE+TDSWNKF+DSK HLG S++LEAAALV
Sbjct: 181 GMVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALV 240
Query: 365 PLGGKLCIIRNNMTISLVDVSAPDKHVESNPGLWETIIERRGHFRSMLTTIWSSIAGRSG 424
PL KLCIIRNNM++SLVDVS PDK+ NP LWE I +G +S+L+ IWSSIAGR+
Sbjct: 241 PLHNKLCIIRNNMSMSLVDVSNPDKN---NPRLWEN-IAVKGQSKSILSNIWSSIAGRA- 295
Query: 425 LKSHIVHCQVLQA 437
LKSHIVHCQVLQA
Sbjct: 296 LKSHIVHCQVLQA 308
>AT1G30090.1 | Galactose oxidase/kelch repeat superfamily protein |
Chr1:10559746-10560942 REVERSE LENGTH=398 | 201606
Length = 398
Score = 130 bits (327), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 20/322 (6%)
Query: 75 PLLPGLPDDLAIACLVRVPRAEHRKLRLVCKKWYRLL-AGNFFYSLRQNLGMSEEWVYVI 133
PL+PGLPDD+A+ CL+RVP H + VCK+W+ L F++ R+ G + W++V+
Sbjct: 52 PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVV 111
Query: 134 KRDR-DGRLSWHAFDPAYQLWQPLPPVPLEYSEVLGFGCAVLSGFR---LYLFGGK-DPL 188
R G++ W D W +P +P +V G +S R +++ GG
Sbjct: 112 GFSRCTGKIQWKVLDLRNLTWHEIPAMPCR-DKVCPHGFRSVSMPREGTMFVCGGMVSDS 170
Query: 189 RGSMRRVIFYSARTNKWHRGPAMLRKRHFFGSCVINNCLYVAGGECEGAPRTLRSAEVYD 248
+ V+ Y N W M+ R FF S VI+ +Y AGG L AEV +
Sbjct: 171 DCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADL-YELDCAEVLN 229
Query: 249 PNKNKWSLISEMSTPMVPFIGVVYNGK------WFLKGLGSHRQVMSEAYIPETNTWTPV 302
P W +S M M + V NGK W S R + Y P T+ W +
Sbjct: 230 PLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFVSPR---GQVYDPRTDQWETM 286
Query: 303 TDGMVSGWRNPSISLNGNLYALDCRDGCKLRIYDEATDSWNKFIDSKLHLGTSRALEAAA 362
+ G+ GW S+ + L+ + + K+++YD TDSW +L R A
Sbjct: 287 SMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELPEQICRPF---A 343
Query: 363 LVPLGGKLCIIRNNMTISLVDV 384
+ G ++ ++ N+ +++ ++
Sbjct: 344 VNCYGNRVYVVGRNLHLAVGNI 365
>AT1G22040.1 | Galactose oxidase/kelch repeat superfamily protein |
Chr1:7768370-7769797 FORWARD LENGTH=475 | 201606
Length = 475
Score = 131 bits (330), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 192/434 (44%), Gaps = 75/434 (17%)
Query: 76 LLPGLPDDLAIACLVRVPRAEHRKLRLVCKKWYRLLAGNFFYSLRQNLGMSEEWVYVIKR 135
L+P LPD+L+I L R+PR + +RLV ++W ++ + YSLR+ LG +EEW+YV+ +
Sbjct: 43 LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102
Query: 136 DRDGRLSWHAFDPAYQLWQPLPPVPL---------------------------------- 161
+ +L W+A DP WQ LPP+P+
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162
Query: 162 -EYSEVLGF-GCAV--LSGFRLYLFGGKDPLRGSMRRVIFYSARTNKWHRGPAMLRKRHF 217
+ SE + F GCA+ + G LY+ GG + ++ V + N W +ML R +
Sbjct: 163 RDSSEQMPFCGCAIGAVDG-GLYVIGGLSRSK-TVSCVWRFDPILNSWSEVSSMLASRAY 220
Query: 218 FGSCVINNCLYVAGGECEGAP--RTLRSAEVYDPNKNKWSLISEM---STPMVP--FIG- 269
+ V+N LYV GG G L+SAEVYDP+ + WS + M ++P F+
Sbjct: 221 SKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLAD 280
Query: 270 ---------VVYNGKWFL-KGLGS---HRQVMSEAYIPETNTWTPVTDGMVSGW------ 310
YNG+ + + L S V E Y PETN W + GM GW
Sbjct: 281 LLKPIATGMTCYNGRLCVPQSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQAG 340
Query: 311 RNPSISLNGNLYALD---CRDGCKLRIYDEATDSWNKFIDSKLHLGTSRALEAAALVPLG 367
S+ ++G LYA D + K+++YD+ D+W I + + L
Sbjct: 341 TKLSVVVDGELYAFDPSSSMENGKIKVYDQKEDTWKVVIGEVPVYDLTDSESPYLLAGFH 400
Query: 368 GKLCII----RNNMTISLVDVSAPDKHVESNPGLWETIIERRGHFRSMLTTI-WSSIAGR 422
GKL I +N+T+ DV S+ +I + + + T+ W IA +
Sbjct: 401 GKLHFITRDPNHNVTVLRADVPNIPVSSSSSSSSSVSIPHLKTNAPNKSDTVTWKLIATK 460
Query: 423 SGLKSHIVHCQVLQ 436
+ +V CQV+
Sbjct: 461 DFGAAELVSCQVID 474
>AT3G61350.2 | SKP1 interacting partner 4 | Chr3:22703203-22704374
FORWARD LENGTH=358 | 201606
Length = 358
Score = 124 bits (310), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 37/353 (10%)
Query: 70 SRVQTPLLPGLPDDLAIACLVRVPRAEHRKLRLVCKKWYRLLAGNFFYSLRQNLGMSEEW 129
+ Q L+ G+PDD++ +CL RVPR H ++ V ++W + + R ++E W
Sbjct: 15 NETQIALISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEFNLAESW 74
Query: 130 VYVIKRDRDGRLSWHAFDP-----AYQLWQPLPPVPLEYSEVLGFGCAVLSGFRLYLFGG 184
+Y + RD G + H +P +++ P +P+ G G AVL G RL++ GG
Sbjct: 75 IYALCRDISGGVFLHMLNPFSSRRSWKRINDYPYIPMRE----GMGFAVL-GKRLFVLGG 129
Query: 185 KDPLRGSMRRVIFYSARTNKWHR-GPAMLRKRHFFGSCVINNCLYVAGGECEGAPRTLRS 243
L + + Y A N W P + KR +F ++ + GG P R+
Sbjct: 130 CGWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGLN-PNAKRT 188
Query: 244 AEVYDPNKNKWSLISEMSTPMVPFI--GVVYNGKWFLK-GLGSHRQVMSEAYIPETNTWT 300
++YDP S+++ +VP + V +G+ +++ G+G + Y + W
Sbjct: 189 WDIYDPLTRTCKSCSDVN--IVPEMEDSFVMDGRIYIRGGVGGSS---TAVYSASSGIWE 243
Query: 301 PVTDGMVSGWRNPSISLNGNLYALDCRDGCKLRIYDEATDSWNKFIDSKLHLGTSRAL-- 358
+ D M SGWR P++ + G+LY LD G KL ++ + T W +H+G L
Sbjct: 244 RMDDDMASGWRGPAVVVAGDLYVLDQTFGAKLTMWCKDTRMW-------IHIGKLSQLVM 296
Query: 359 -EAAALVPLGGKLCIIRNNMTISLVDVSAPDKH-------VESNPGLWETIIE 403
+ LV +G + +I + + ++DV K+ S P W+ I+
Sbjct: 297 KQPCRLVSIGNSIFVIGKDCSTVVIDVENVRKNKMNGVMVCSSIPKTWDDDID 349