BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2140.1
(1498 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57300.4 | DNA helicase INO80-like protein | Chr3:21199612-21... 1882 0.0
AT3G57300.1 | DNA helicase INO80-like protein | Chr3:21199612-21... 1882 0.0
AT3G57300.2 | DNA helicase INO80-like protein | Chr3:21199612-21... 1855 0.0
AT3G57300.3 | DNA helicase INO80-like protein | Chr3:21199612-21... 1547 0.0
AT3G12810.2 | SNF2 domain-containing protein / helicase domain-c... 321 9e-89
>AT3G57300.4 | DNA helicase INO80-like protein |
Chr3:21199612-21207635 FORWARD LENGTH=1507 | 201606
Length = 1507
Score = 1882 bits (4874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 962/1527 (62%), Positives = 1148/1527 (75%), Gaps = 125/1527 (8%)
Query: 13 YSNLFNLEPLMNFQLPQQDDDFDNYENSSQDESRGNQGRRAMVDRSNGISTKKNNKRRLI 72
Y+NLF+LEPLM F++P+ +D+ D Y +SSQDESR QG + + SNG ++ N
Sbjct: 13 YANLFDLEPLMKFRIPKPEDEVDYYGSSSQDESRSTQGG-VVANYSNGSKSRMN------ 65
Query: 73 EGEAGSNSSSKRDTDSNAEDDGSGNYGTHISEDWYRSLLGEHIKKYRGMRFKESSGPNST 132
S+ KR T++ +D Y H++E+ YRS+LGEH++K++ R KE+ G
Sbjct: 66 ----ASSKKRKRWTEAEDAEDDDDLYNQHVTEEHYRSMLGEHVQKFKN-RSKETQGNPPH 120
Query: 133 RAEMPVQNRNLGS-KSRKLGSSER-VLHEMETPLKYTADINPLKSENYFDSDFTPEYAVD 190
PV N+GS + RK G+ ++M+ + AD+ P + +Y D D TP+ A +
Sbjct: 121 LMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITPKIAYE 180
Query: 191 RFPSSNDNAYLDIGEGITYRIPPTYDKLAASLKLPSFSDVRVEDYYLRGTLDLGSLGAMM 250
PS YLDIG+G+ Y+IPP+YDKL ASL LPSFSD+ VE++YL+GTLDL SL +M
Sbjct: 181 --PS-----YLDIGDGVIYKIPPSYDKLVASLNLPSFSDIHVEEFYLKGTLDLRSLAELM 233
Query: 251 ANDKRFVSGGRAGMGDPHPQYKSLQAKLKALSSSKSVQKFTLQVCDTGLDSSSIPDDAAG 310
A+DKR R GMG+P PQY+SLQA++KALS S S F+L+V + ++S+ IP+ +AG
Sbjct: 234 ASDKRSGVRSRNGMGEPRPQYESLQARMKALSPSNSTPNFSLKVSEAAMNSA-IPEGSAG 292
Query: 311 SIRRSIISEAGNLQMYYVKVLEKGDTYEIIERRLPKKPKIKKDAAYIEREEMEKVGKFW- 369
S R+I+SE G LQ++YVK+LEKGDTYEI++R LPKK K K D A IE+ E +K+ K W
Sbjct: 293 STARTILSEGGVLQVHYVKILEKGDTYEIVKRSLPKKLKAKNDPAVIEKTERDKIRKAWI 352
Query: 370 -----------------------------------VRLKVHRSVKVARQANIRTRKLARD 394
VR+KV RS K+ R A IRTRK++RD
Sbjct: 353 NIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKIPRTAPIRTRKISRD 412
Query: 395 MLVFWKKIDKEQAEIRKKEEKEAAEALKREQELREAKRQQQRLNFLLSQTELFSHFMQNK 454
ML+FWK+ DK+ AE RKK+EKEAAEA KREQE RE+KRQQQRLNFL+ QTEL+SHFMQNK
Sbjct: 413 MLLFWKRYDKQMAEERKKQEKEAAEAFKREQEQRESKRQQQRLNFLIKQTELYSHFMQNK 472
Query: 455 SNSQPSETLPAGEESNALEVPLSSSDVTVKEEEDPEEVKLKKEALRAAQQAVSQQKMITD 514
++S PSE LP G+E+ EV +S E EDPEE +LK++ LRAAQ AVS+QK ITD
Sbjct: 473 TDSNPSEALPIGDENPIDEVLPETSAAEPSEVEDPEEAELKEKVLRAAQDAVSKQKQITD 532
Query: 515 AFDNECSKLRQAAEPDALANDAAIAGSSSIDLLNPSTMPVTSSVQTPELFKGSLKEYQLK 574
AFD E KLRQ +E + ND +++GSS+IDL NPSTMPVTS+VQTPELFKG+LKEYQ+K
Sbjct: 533 AFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMK 592
Query: 575 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 634
GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD
Sbjct: 593 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 652
Query: 635 EISRFCPDLKTLPYWGGLQERTVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRV 694
EISRFCPDLKTLPYWGGLQERT+LRKNINPKR+YRR+AGFHILITSYQLLV+DEKYFRRV
Sbjct: 653 EISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRV 712
Query: 695 KWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFD 754
KWQYMVLDEAQAIKSS+SIRWKTLLSFNCRNRLLLTGTP+QNNMAELWALLHFIMP LFD
Sbjct: 713 KWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFD 772
Query: 755 SHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPFMLRRVKKDVITEMTGKKEVTVH 814
+HDQFNEWFSKGIENHAEHGGTLNEHQLNRLHA+LKPFMLRRVKKDV++E+T K EVTVH
Sbjct: 773 NHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVH 832
Query: 815 CKLSTRQQAFYQAIKNKISLAELFDSNRGHLNEKKIMNLMNIVIQLRKVCNHPELFERNE 874
CKLS+RQQAFYQAIKNKISLAELFDSNRG +KK++NLMNIVIQLRKVCNHPELFERNE
Sbjct: 833 CKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNE 892
Query: 875 GNTYLYFGDIANSLLPPPFGELEDVHYAGGQNPITY------------------------ 910
G++YLYFG +NSLLP PFGELEDVHY+GGQNPI Y
Sbjct: 893 GSSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKLLHQEVLQNSETFCSSVGRG 952
Query: 911 ------MKHFDIFSPMNILRSARSYTS--DRFSFNGETFGFSHLINLSTEEVAFLAKGSL 962
+KHF+I+SP IL+S S D+ FGFS L++LS EV +LA S+
Sbjct: 953 ISRESFLKHFNIYSPEYILKSIFPSDSGVDQVVSGSGAFGFSRLMDLSPSEVGYLALCSV 1012
Query: 963 MERLLFSIY---RRFVDESLDSIMEDKNDDFQCNGLEEQKVRAVTRMLLVPSRSESNLLR 1019
ERLLFSI R+F+DE ++S+ME K+ D N +E K +AVTRMLL+PS+ E+N +
Sbjct: 1013 AERLLFSILRWERQFLDELVNSLMESKDGDLSDNNIERVKTKAVTRMLLMPSKVETNFQK 1072
Query: 1020 RKLAECTADDLYEALVVSHQNRLIANTRLLHSTYAFIPKTRAPPITAHCSNRNFAYNILE 1079
R+L+ +EALV+SHQ+R +++ +LLHS Y +IPK RAPP++ HCS+RN AY + E
Sbjct: 1073 RRLSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTE 1132
Query: 1080 ELHHPWLKKMFFGFSRTSNFNGPREPKP-PHHLIQEIDSELPVTQPILQLTYKIFGSSPP 1138
ELH PWLK++ GF+RTS NGPR+P PH LIQEIDSELPV QP LQLT++IFGS PP
Sbjct: 1133 ELHQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPP 1192
Query: 1139 LQNFDTAKMLTDSGKLQTLDILLKRLRAGNHRILLFAQMTKMLNILEDYMNYRKYKYLRL 1198
+Q+FD AK+LTDSGKLQTLDILLKRLRAGNHR+LLFAQMTKMLNILEDYMNYRKYKYLRL
Sbjct: 1193 MQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRL 1252
Query: 1199 DGSSTIMDRRDMVRDFQRRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1258
DGSSTIMDRRDMVRDFQ R+DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM
Sbjct: 1253 DGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1312
Query: 1259 DRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQG-DLLAPEDVVS 1317
DRAHRLGQTKDVTVYRLICKETVEEKIL RASQKNTVQQLVMTGGHVQG D L DVVS
Sbjct: 1313 DRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVS 1372
Query: 1318 LLFDD---AQLEQKFRGIPMQGKDRQKKKPGTKGIRIDAEGEASLDDLANISTTGAVPES 1374
LL DD AQLEQKFR +P+Q KDRQKKK TK IRIDAEG+A+L++L ++ E
Sbjct: 1373 LLMDDAEAAQLEQKFRELPLQVKDRQKKK--TKRIRIDAEGDATLEELEDVDRQDNGQEP 1430
Query: 1375 VPQLESGPTENKKRKANSDKQSAPRPRLSQKATLKTDSSIRMTEHKAIDSGFEDPLESTH 1434
+ + E + NKKR+A S+ P+ R QKA + + ED
Sbjct: 1431 LEEPEKPKSSNKKRRAASN----PKARAPQKAKEEANG--------------EDT----- 1467
Query: 1435 PQQPKLKKPKKPKRSVNENLEPAFPAA 1461
PQ + K+ K+ +S+NE+LEP F A+
Sbjct: 1468 PQ--RTKRVKRQTKSINESLEPVFSAS 1492
>AT3G57300.1 | DNA helicase INO80-like protein |
Chr3:21199612-21207635 FORWARD LENGTH=1507 | 201606
Length = 1507
Score = 1882 bits (4874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 962/1527 (62%), Positives = 1148/1527 (75%), Gaps = 125/1527 (8%)
Query: 13 YSNLFNLEPLMNFQLPQQDDDFDNYENSSQDESRGNQGRRAMVDRSNGISTKKNNKRRLI 72
Y+NLF+LEPLM F++P+ +D+ D Y +SSQDESR QG + + SNG ++ N
Sbjct: 13 YANLFDLEPLMKFRIPKPEDEVDYYGSSSQDESRSTQGG-VVANYSNGSKSRMN------ 65
Query: 73 EGEAGSNSSSKRDTDSNAEDDGSGNYGTHISEDWYRSLLGEHIKKYRGMRFKESSGPNST 132
S+ KR T++ +D Y H++E+ YRS+LGEH++K++ R KE+ G
Sbjct: 66 ----ASSKKRKRWTEAEDAEDDDDLYNQHVTEEHYRSMLGEHVQKFKN-RSKETQGNPPH 120
Query: 133 RAEMPVQNRNLGS-KSRKLGSSER-VLHEMETPLKYTADINPLKSENYFDSDFTPEYAVD 190
PV N+GS + RK G+ ++M+ + AD+ P + +Y D D TP+ A +
Sbjct: 121 LMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITPKIAYE 180
Query: 191 RFPSSNDNAYLDIGEGITYRIPPTYDKLAASLKLPSFSDVRVEDYYLRGTLDLGSLGAMM 250
PS YLDIG+G+ Y+IPP+YDKL ASL LPSFSD+ VE++YL+GTLDL SL +M
Sbjct: 181 --PS-----YLDIGDGVIYKIPPSYDKLVASLNLPSFSDIHVEEFYLKGTLDLRSLAELM 233
Query: 251 ANDKRFVSGGRAGMGDPHPQYKSLQAKLKALSSSKSVQKFTLQVCDTGLDSSSIPDDAAG 310
A+DKR R GMG+P PQY+SLQA++KALS S S F+L+V + ++S+ IP+ +AG
Sbjct: 234 ASDKRSGVRSRNGMGEPRPQYESLQARMKALSPSNSTPNFSLKVSEAAMNSA-IPEGSAG 292
Query: 311 SIRRSIISEAGNLQMYYVKVLEKGDTYEIIERRLPKKPKIKKDAAYIEREEMEKVGKFW- 369
S R+I+SE G LQ++YVK+LEKGDTYEI++R LPKK K K D A IE+ E +K+ K W
Sbjct: 293 STARTILSEGGVLQVHYVKILEKGDTYEIVKRSLPKKLKAKNDPAVIEKTERDKIRKAWI 352
Query: 370 -----------------------------------VRLKVHRSVKVARQANIRTRKLARD 394
VR+KV RS K+ R A IRTRK++RD
Sbjct: 353 NIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKIPRTAPIRTRKISRD 412
Query: 395 MLVFWKKIDKEQAEIRKKEEKEAAEALKREQELREAKRQQQRLNFLLSQTELFSHFMQNK 454
ML+FWK+ DK+ AE RKK+EKEAAEA KREQE RE+KRQQQRLNFL+ QTEL+SHFMQNK
Sbjct: 413 MLLFWKRYDKQMAEERKKQEKEAAEAFKREQEQRESKRQQQRLNFLIKQTELYSHFMQNK 472
Query: 455 SNSQPSETLPAGEESNALEVPLSSSDVTVKEEEDPEEVKLKKEALRAAQQAVSQQKMITD 514
++S PSE LP G+E+ EV +S E EDPEE +LK++ LRAAQ AVS+QK ITD
Sbjct: 473 TDSNPSEALPIGDENPIDEVLPETSAAEPSEVEDPEEAELKEKVLRAAQDAVSKQKQITD 532
Query: 515 AFDNECSKLRQAAEPDALANDAAIAGSSSIDLLNPSTMPVTSSVQTPELFKGSLKEYQLK 574
AFD E KLRQ +E + ND +++GSS+IDL NPSTMPVTS+VQTPELFKG+LKEYQ+K
Sbjct: 533 AFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMK 592
Query: 575 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 634
GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD
Sbjct: 593 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 652
Query: 635 EISRFCPDLKTLPYWGGLQERTVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRV 694
EISRFCPDLKTLPYWGGLQERT+LRKNINPKR+YRR+AGFHILITSYQLLV+DEKYFRRV
Sbjct: 653 EISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRV 712
Query: 695 KWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFD 754
KWQYMVLDEAQAIKSS+SIRWKTLLSFNCRNRLLLTGTP+QNNMAELWALLHFIMP LFD
Sbjct: 713 KWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFD 772
Query: 755 SHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPFMLRRVKKDVITEMTGKKEVTVH 814
+HDQFNEWFSKGIENHAEHGGTLNEHQLNRLHA+LKPFMLRRVKKDV++E+T K EVTVH
Sbjct: 773 NHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVH 832
Query: 815 CKLSTRQQAFYQAIKNKISLAELFDSNRGHLNEKKIMNLMNIVIQLRKVCNHPELFERNE 874
CKLS+RQQAFYQAIKNKISLAELFDSNRG +KK++NLMNIVIQLRKVCNHPELFERNE
Sbjct: 833 CKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNE 892
Query: 875 GNTYLYFGDIANSLLPPPFGELEDVHYAGGQNPITY------------------------ 910
G++YLYFG +NSLLP PFGELEDVHY+GGQNPI Y
Sbjct: 893 GSSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKLLHQEVLQNSETFCSSVGRG 952
Query: 911 ------MKHFDIFSPMNILRSARSYTS--DRFSFNGETFGFSHLINLSTEEVAFLAKGSL 962
+KHF+I+SP IL+S S D+ FGFS L++LS EV +LA S+
Sbjct: 953 ISRESFLKHFNIYSPEYILKSIFPSDSGVDQVVSGSGAFGFSRLMDLSPSEVGYLALCSV 1012
Query: 963 MERLLFSIY---RRFVDESLDSIMEDKNDDFQCNGLEEQKVRAVTRMLLVPSRSESNLLR 1019
ERLLFSI R+F+DE ++S+ME K+ D N +E K +AVTRMLL+PS+ E+N +
Sbjct: 1013 AERLLFSILRWERQFLDELVNSLMESKDGDLSDNNIERVKTKAVTRMLLMPSKVETNFQK 1072
Query: 1020 RKLAECTADDLYEALVVSHQNRLIANTRLLHSTYAFIPKTRAPPITAHCSNRNFAYNILE 1079
R+L+ +EALV+SHQ+R +++ +LLHS Y +IPK RAPP++ HCS+RN AY + E
Sbjct: 1073 RRLSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTE 1132
Query: 1080 ELHHPWLKKMFFGFSRTSNFNGPREPKP-PHHLIQEIDSELPVTQPILQLTYKIFGSSPP 1138
ELH PWLK++ GF+RTS NGPR+P PH LIQEIDSELPV QP LQLT++IFGS PP
Sbjct: 1133 ELHQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPP 1192
Query: 1139 LQNFDTAKMLTDSGKLQTLDILLKRLRAGNHRILLFAQMTKMLNILEDYMNYRKYKYLRL 1198
+Q+FD AK+LTDSGKLQTLDILLKRLRAGNHR+LLFAQMTKMLNILEDYMNYRKYKYLRL
Sbjct: 1193 MQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRL 1252
Query: 1199 DGSSTIMDRRDMVRDFQRRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1258
DGSSTIMDRRDMVRDFQ R+DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM
Sbjct: 1253 DGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1312
Query: 1259 DRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQG-DLLAPEDVVS 1317
DRAHRLGQTKDVTVYRLICKETVEEKIL RASQKNTVQQLVMTGGHVQG D L DVVS
Sbjct: 1313 DRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVS 1372
Query: 1318 LLFDD---AQLEQKFRGIPMQGKDRQKKKPGTKGIRIDAEGEASLDDLANISTTGAVPES 1374
LL DD AQLEQKFR +P+Q KDRQKKK TK IRIDAEG+A+L++L ++ E
Sbjct: 1373 LLMDDAEAAQLEQKFRELPLQVKDRQKKK--TKRIRIDAEGDATLEELEDVDRQDNGQEP 1430
Query: 1375 VPQLESGPTENKKRKANSDKQSAPRPRLSQKATLKTDSSIRMTEHKAIDSGFEDPLESTH 1434
+ + E + NKKR+A S+ P+ R QKA + + ED
Sbjct: 1431 LEEPEKPKSSNKKRRAASN----PKARAPQKAKEEANG--------------EDT----- 1467
Query: 1435 PQQPKLKKPKKPKRSVNENLEPAFPAA 1461
PQ + K+ K+ +S+NE+LEP F A+
Sbjct: 1468 PQ--RTKRVKRQTKSINESLEPVFSAS 1492
>AT3G57300.2 | DNA helicase INO80-like protein |
Chr3:21199612-21207635 FORWARD LENGTH=1540 | 201606
Length = 1540
Score = 1855 bits (4805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 960/1560 (61%), Positives = 1145/1560 (73%), Gaps = 158/1560 (10%)
Query: 13 YSNLFNLEPLMNFQLPQQDDDFDNYENSSQDESRGNQGRRAMVDRSNGISTKKNNKRRLI 72
Y+NLF+LEPLM F++P+ +D+ D Y +SSQDESR QG + + SNG ++ N
Sbjct: 13 YANLFDLEPLMKFRIPKPEDEVDYYGSSSQDESRSTQGG-VVANYSNGSKSRMN------ 65
Query: 73 EGEAGSNSSSKRDTDSNAEDDGSGNYGTHISEDWYRSLLGEHIKKYRGMRFKESSGPNST 132
S+ KR T++ +D Y H++E+ YRS+LGEH++K++ R KE+ G
Sbjct: 66 ----ASSKKRKRWTEAEDAEDDDDLYNQHVTEEHYRSMLGEHVQKFKN-RSKETQGNPPH 120
Query: 133 RAEMPVQNRNLGS-KSRKLGSSER-VLHEMETPLKYTADINPLKSENYFDSDFTPEYAVD 190
PV N+GS + RK G+ ++M+ + AD+ P + +Y D D TP+ A +
Sbjct: 121 LMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITPKIAYE 180
Query: 191 RFPSSNDNAYLDIGEGITYRIPPTYDKLAASLKLPSFSDVRVEDYYLRGTLDLGSLGAMM 250
PS YLDIG+G+ Y+IPP+YDKL ASL LPSFSD+ VE++YL+GTLDL SL +M
Sbjct: 181 --PS-----YLDIGDGVIYKIPPSYDKLVASLNLPSFSDIHVEEFYLKGTLDLRSLAELM 233
Query: 251 ANDKRFVSGGRAGMGDPHPQYKSLQAKLKALSSSKSVQKFTLQVCDTGLDSSSIPDDAAG 310
A+DKR R GMG+P PQY+SLQA++KALS S S F+L+V + ++S+ IP+ +AG
Sbjct: 234 ASDKRSGVRSRNGMGEPRPQYESLQARMKALSPSNSTPNFSLKVSEAAMNSA-IPEGSAG 292
Query: 311 SIRRSIISEAGNLQMYYVKVLEKGDTYEIIERRLPKKPKIKKDAAYIEREEMEKVGKFW- 369
S R+I+SE G LQ++YVK+LEKGDTYEI++R LPKK K K D A IE+ E +K+ K W
Sbjct: 293 STARTILSEGGVLQVHYVKILEKGDTYEIVKRSLPKKLKAKNDPAVIEKTERDKIRKAWI 352
Query: 370 -----------------------------------VRLKVHRSVKVARQANIRTRKLARD 394
VR+KV RS K+ R A IRTRK++RD
Sbjct: 353 NIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKIPRTAPIRTRKISRD 412
Query: 395 MLVFWKKIDKEQAEIRKKEEKEAAEALKREQELREAKRQQQRLNFLLSQTELFSHFMQNK 454
ML+FWK+ DK+ AE RKK+EKEAAEA KREQE RE+KRQQQRLNFL+ QTEL+SHFMQNK
Sbjct: 413 MLLFWKRYDKQMAEERKKQEKEAAEAFKREQEQRESKRQQQRLNFLIKQTELYSHFMQNK 472
Query: 455 SNSQPSETLPAGEESNALEVPLSSSDVTVKEEEDPEEVKLKKEALRAAQQAVSQQKMITD 514
++S PSE LP G+E+ EV +S E EDPEE +LK++ LRAAQ AVS+QK ITD
Sbjct: 473 TDSNPSEALPIGDENPIDEVLPETSAAEPSEVEDPEEAELKEKVLRAAQDAVSKQKQITD 532
Query: 515 AFDNECSKLRQAAEPDALANDAAIAGSSSIDLLNPSTMPVTSSVQTPELFKGSLKEYQLK 574
AFD E KLRQ +E + ND +++GSS+IDL NPSTMPVTS+VQTPELFKG+LKEYQ+K
Sbjct: 533 AFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMK 592
Query: 575 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 634
GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD
Sbjct: 593 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 652
Query: 635 EISRFCPDLKTLPYWGGLQERTVLRKNINPKR---------------------------- 666
EISRFCPDLKTLPYWGGLQERT+LRKNINPKR
Sbjct: 653 EISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISFDPWAVRQICICKRACNV 712
Query: 667 -----LYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF 721
L +AGFHILITSYQLLV+DEKYFRRVKWQYMVLDEAQAIKSS+SIRWKTLLSF
Sbjct: 713 VRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSF 772
Query: 722 NCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHDQFNEWFSKGIENHAEHGGTLNEHQ 781
NCRNRLLLTGTP+QNNMAELWALLHFIMP LFD+HDQFNEWFSKGIENHAEHGGTLNEHQ
Sbjct: 773 NCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQ 832
Query: 782 LNRLHAVLKPFMLRRVKKDVITEMTGKKEVTVHCKLSTRQQAFYQAIKNKISLAELFDSN 841
LNRLHA+LKPFMLRRVKKDV++E+T K EVTVHCKLS+RQQAFYQAIKNKISLAELFDSN
Sbjct: 833 LNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSN 892
Query: 842 RGHLNEKKIMNLMNIVIQLRKVCNHPELFERNEGNTYLYFGDIANSLLPPPFGELEDVHY 901
RG +KK++NLMNIVIQLRKVCNHPELFERNEG++YLYFG +NSLLP PFGELEDVHY
Sbjct: 893 RGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGELEDVHY 952
Query: 902 AGGQNPITY------------------------------MKHFDIFSPMNILRSARSYTS 931
+GGQNPI Y +KHF+I+SP IL+S S
Sbjct: 953 SGGQNPIIYKIPKLLHQEVLQNSETFCSSVGRGISRESFLKHFNIYSPEYILKSIFPSDS 1012
Query: 932 --DRFSFNGETFGFSHLINLSTEEVAFLAKGSLMERLLFSIY---RRFVDESLDSIMEDK 986
D+ FGFS L++LS EV +LA S+ ERLLFSI R+F+DE ++S+ME K
Sbjct: 1013 GVDQVVSGSGAFGFSRLMDLSPSEVGYLALCSVAERLLFSILRWERQFLDELVNSLMESK 1072
Query: 987 NDDFQCNGLEEQKVRAVTRMLLVPSRSESNLLRRKLAECTADDLYEALVVSHQNRLIANT 1046
+ D N +E K +AVTRMLL+PS+ E+N +R+L+ +EALV+SHQ+R +++
Sbjct: 1073 DGDLSDNNIERVKTKAVTRMLLMPSKVETNFQKRRLSTGPTRPSFEALVISHQDRFLSSI 1132
Query: 1047 RLLHSTYAFIPKTRAPPITAHCSNRNFAYNILEELHHPWLKKMFFGFSRTSNFNGPREPK 1106
+LLHS Y +IPK RAPP++ HCS+RN AY + EELH PWLK++ GF+RTS NGPR+P
Sbjct: 1133 KLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTEELHQPWLKRLLIGFARTSEANGPRKPN 1192
Query: 1107 P-PHHLIQEIDSELPVTQPILQLTYKIFGSSPPLQNFDTAKMLTDSGKLQTLDILLKRLR 1165
PH LIQEIDSELPV QP LQLT++IFGS PP+Q+FD AK+LTDSGKLQTLDILLKRLR
Sbjct: 1193 SFPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLR 1252
Query: 1166 AGNHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQRRNDIFVFLL 1225
AGNHR+LLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQ R+DIFVFLL
Sbjct: 1253 AGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLL 1312
Query: 1226 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1285
STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI
Sbjct: 1313 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1372
Query: 1286 LQRASQKNTVQQLVMTGGHVQG-DLLAPEDVVSLLFDD---AQLEQKFRGIPMQGKDRQK 1341
L RASQKNTVQQLVMTGGHVQG D L DVVSLL DD AQLEQKFR +P+Q KDRQK
Sbjct: 1373 LHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLMDDAEAAQLEQKFRELPLQVKDRQK 1432
Query: 1342 KKPGTKGIRIDAEGEASLDDLANISTTGAVPESVPQLESGPTENKKRKANSDKQSAPRPR 1401
KK TK IRIDAEG+A+L++L ++ E + + E + NKKR+A S+ P+ R
Sbjct: 1433 KK--TKRIRIDAEGDATLEELEDVDRQDNGQEPLEEPEKPKSSNKKRRAASN----PKAR 1486
Query: 1402 LSQKATLKTDSSIRMTEHKAIDSGFEDPLESTHPQQPKLKKPKKPKRSVNENLEPAFPAA 1461
QKA + + ED PQ + K+ K+ +S+NE+LEP F A+
Sbjct: 1487 APQKAKEEANG--------------EDT-----PQ--RTKRVKRQTKSINESLEPVFSAS 1525
>AT3G57300.3 | DNA helicase INO80-like protein |
Chr3:21199612-21206187 FORWARD LENGTH=1252 | 201606
Length = 1252
Score = 1547 bits (4006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/1247 (62%), Positives = 939/1247 (75%), Gaps = 94/1247 (7%)
Query: 13 YSNLFNLEPLMNFQLPQQDDDFDNYENSSQDESRGNQGRRAMVDRSNGISTKKNNKRRLI 72
Y+NLF+LEPLM F++P+ +D+ D Y +SSQDESR QG + + SNG ++ N
Sbjct: 13 YANLFDLEPLMKFRIPKPEDEVDYYGSSSQDESRSTQGG-VVANYSNGSKSRMN------ 65
Query: 73 EGEAGSNSSSKRDTDSNAEDDGSGNYGTHISEDWYRSLLGEHIKKYRGMRFKESSGPNST 132
S+ KR T++ +D Y H++E+ YRS+LGEH++K++ R KE+ G
Sbjct: 66 ----ASSKKRKRWTEAEDAEDDDDLYNQHVTEEHYRSMLGEHVQKFKN-RSKETQGNPPH 120
Query: 133 RAEMPVQNRNLGS-KSRKLGSSER-VLHEMETPLKYTADINPLKSENYFDSDFTPEYAVD 190
PV N+GS + RK G+ ++M+ + AD+ P + +Y D D TP+ A +
Sbjct: 121 LMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITPKIAYE 180
Query: 191 RFPSSNDNAYLDIGEGITYRIPPTYDKLAASLKLPSFSDVRVEDYYLRGTLDLGSLGAMM 250
PS YLDIG+G+ Y+IPP+YDKL ASL LPSFSD+ VE++YL+GTLDL SL +M
Sbjct: 181 --PS-----YLDIGDGVIYKIPPSYDKLVASLNLPSFSDIHVEEFYLKGTLDLRSLAELM 233
Query: 251 ANDKRFVSGGRAGMGDPHPQYKSLQAKLKALSSSKSVQKFTLQVCDTGLDSSSIPDDAAG 310
A+DKR R GMG+P PQY+SLQA++KALS S S F+L+V + ++S+ IP+ +AG
Sbjct: 234 ASDKRSGVRSRNGMGEPRPQYESLQARMKALSPSNSTPNFSLKVSEAAMNSA-IPEGSAG 292
Query: 311 SIRRSIISEAGNLQMYYVKVLEKGDTYEIIERRLPKKPKIKKDAAYIEREEMEKVGKFW- 369
S R+I+SE G LQ++YVK+LEKGDTYEI++R LPKK K K D A IE+ E +K+ K W
Sbjct: 293 STARTILSEGGVLQVHYVKILEKGDTYEIVKRSLPKKLKAKNDPAVIEKTERDKIRKAWI 352
Query: 370 -----------------------------------VRLKVHRSVKVARQANIRTRKLARD 394
VR+KV RS K+ R A IRTRK++RD
Sbjct: 353 NIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKIPRTAPIRTRKISRD 412
Query: 395 MLVFWKKIDKEQAEIRKKEEKEAAEALKREQELREAKRQQQRLNFLLSQTELFSHFMQNK 454
ML+FWK+ DK+ AE RKK+EKEAAEA KREQE RE+KRQQQRLNFL+ QTEL+SHFMQNK
Sbjct: 413 MLLFWKRYDKQMAEERKKQEKEAAEAFKREQEQRESKRQQQRLNFLIKQTELYSHFMQNK 472
Query: 455 SNSQPSETLPAGEESNALEVPLSSSDVTVKEEEDPEEVKLKKEALRAAQQAVSQQKMITD 514
++S PSE LP G+E+ EV +S E EDPEE +LK++ LRAAQ AVS+QK ITD
Sbjct: 473 TDSNPSEALPIGDENPIDEVLPETSAAEPSEVEDPEEAELKEKVLRAAQDAVSKQKQITD 532
Query: 515 AFDNECSKLRQAAEPDALANDAAIAGSSSIDLLNPSTMPVTSSVQTPELFKGSLKEYQLK 574
AFD E KLRQ +E + ND +++GSS+IDL NPSTMPVTS+VQTPELFKG+LKEYQ+K
Sbjct: 533 AFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMK 592
Query: 575 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 634
GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD
Sbjct: 593 GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 652
Query: 635 EISRFCPDLKTLPYWGGLQERTVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRV 694
EISRFCPDLKTLPYWGGLQERT+LRKNINPKR+YRR+AGFHILITSYQLLV+DEKYFRRV
Sbjct: 653 EISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRV 712
Query: 695 KWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFD 754
KWQYMVLDEAQAIKSS+SIRWKTLLSFNCRNRLLLTGTP+QNNMAELWALLHFIMP LFD
Sbjct: 713 KWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFD 772
Query: 755 SHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPFMLRRVKKDVITEMTGKKEVTVH 814
+HDQFNEWFSKGIENHAEHGGTLNEHQLNRLHA+LKPFMLRRVKKDV++E+T K EVTVH
Sbjct: 773 NHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVH 832
Query: 815 CKLSTRQQAFYQAIKNKISLAELFDSNRGHLNEKKIMNLMNIVIQLRKVCNHPELFERNE 874
CKLS+RQQAFYQAIKNKISLAELFDSNRG +KK++NLMNIVIQLRKVCNHPELFERNE
Sbjct: 833 CKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNE 892
Query: 875 GNTYLYFGDIANSLLPPPFGELEDVHYAGGQNPITY------------------------ 910
G++YLYFG +NSLLP PFGELEDVHY+GGQNPI Y
Sbjct: 893 GSSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKLLHQEVLQNSETFCSSVGRG 952
Query: 911 ------MKHFDIFSPMNILRSARSYTS--DRFSFNGETFGFSHLINLSTEEVAFLAKGSL 962
+KHF+I+SP IL+S S D+ FGFS L++LS EV +LA S+
Sbjct: 953 ISRESFLKHFNIYSPEYILKSIFPSDSGVDQVVSGSGAFGFSRLMDLSPSEVGYLALCSV 1012
Query: 963 MERLLFSIY---RRFVDESLDSIMEDKNDDFQCNGLEEQKVRAVTRMLLVPSRSESNLLR 1019
ERLLFSI R+F+DE ++S+ME K+ D N +E K +AVTRMLL+PS+ E+N +
Sbjct: 1013 AERLLFSILRWERQFLDELVNSLMESKDGDLSDNNIERVKTKAVTRMLLMPSKVETNFQK 1072
Query: 1020 RKLAECTADDLYEALVVSHQNRLIANTRLLHSTYAFIPKTRAPPITAHCSNRNFAYNILE 1079
R+L+ +EALV+SHQ+R +++ +LLHS Y +IPK RAPP++ HCS+RN AY + E
Sbjct: 1073 RRLSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTE 1132
Query: 1080 ELHHPWLKKMFFGFSRTSNFNGPREPKP-PHHLIQEIDSELPVTQPILQLTYKIFGSSPP 1138
ELH PWLK++ GF+RTS NGPR+P PH LIQEIDSELPV QP LQLT++IFGS PP
Sbjct: 1133 ELHQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPP 1192
Query: 1139 LQNFDTAKMLTDSGKLQTLDILLKRLRAGNHRILLFAQMTKMLNILE 1185
+Q+FD AK+LTDSGKLQTLDILLKRLRAGNHR+LLFAQMTKMLNILE
Sbjct: 1193 MQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 1239
>AT3G12810.2 | SNF2 domain-containing protein / helicase
domain-containing protein | Chr3:4065636-4073992 FORWARD
LENGTH=2051 | 201606
Length = 2051
Score = 321 bits (822), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 151/319 (47%), Positives = 212/319 (66%), Gaps = 15/319 (4%)
Query: 555 TSSVQT--PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 612
T+ V+T P L K SL+EYQ GL WLV YE+ LNGILADEMGLGKTI +A LAHLA
Sbjct: 517 TTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLAC 576
Query: 613 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTVLRKNINPKRLYRREA 672
+K IWGP L+V P SV+ NW E ++CP K L Y+G +ER + R+ + +
Sbjct: 577 DKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQG------WMKLN 630
Query: 673 GFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 732
FH+ IT+Y+L++ D K F+R KW+Y++LDEA IK+ S RW+TLL+FN + R+LLTGT
Sbjct: 631 SFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGT 690
Query: 733 PVQNNMAELWALLHFIMPTLFDSHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPF 792
P+QN++ ELW+L+HF+MP +F SH +F +WF I E +N+ ++RLH VL+PF
Sbjct: 691 PLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPF 750
Query: 793 MLRRVKKDVITEMTGKKEVTVHCKLSTRQQAFYQAIKNKISLAELFDSNRGHLNEKKIMN 852
+LRR+K+DV ++ K E + C+LS RQ+ Y+ I+ E + L
Sbjct: 751 LLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDF---IASTE----TQATLTSGSFFG 803
Query: 853 LMNIVIQLRKVCNHPELFE 871
+++I++QLRKVCNHP+LFE
Sbjct: 804 MISIIMQLRKVCNHPDLFE 822
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 120/170 (70%)
Query: 1150 DSGKLQTLDILLKRLRAGNHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRD 1209
D GKLQ L +LL++L+ G HR L+F QMTKML++LE ++N Y Y+RLDGS+ +R+
Sbjct: 1069 DCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQT 1128
Query: 1210 MVRDFQRRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1269
+++ F IF+F+LSTR+GG+GINL ADTVIFY+SDWNP +D QA DR HR+GQT++
Sbjct: 1129 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1188
Query: 1270 VTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLL 1319
V +YRLI + T+EE IL++A+QK + LV+ G + D + L
Sbjct: 1189 VHIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELF 1238