BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2280.1
(1467 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 568 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 568 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 221 3e-65
AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447... 120 4e-30
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 104 4e-26
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 568 bits (1463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 268/523 (51%), Positives = 363/523 (69%), Gaps = 9/523 (1%)
Query: 903 RNCHPPVKYKDYICSTMTTSIMEGPKYPLNHFISFDQFSPTHKIFLTNVLGTEEPTSFKQ 962
R P +DY C ++ + + + ++ F+S+++ SP + FL + +EP+++ +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTI----HDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNE 91
Query: 963 AMKSQEWQEAMAKEVSALESNNTWSLTTLPPNKSAIGCKWVYKIKYKPDGSIERYKARLV 1022
A + W AM E+ A+E+ +TW + TLPPNK IGCKWVYKIKY DG+IERYKARLV
Sbjct: 92 AKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLV 151
Query: 1023 AKGYTQVEGIDYHDTFAPVAKLVTVRVLLSLAAIKEWPLHQMDVNNAFLQGDLNEEVYMK 1082
AKGYTQ EGID+ +TF+PV KL +V+++L+++AI + LHQ+D++NAFL GDL+EE+YMK
Sbjct: 152 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 211
Query: 1083 IPPGFA-KSGD----NRVCRLHKSLYGLKQASRQWFAKFSTALLDEGFKQSLADYSLFTY 1137
+PPG+A + GD N VC L KS+YGLKQASRQWF KFS L+ GF QS +D++ F
Sbjct: 212 LPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLK 271
Query: 1138 HKGSVSLFVLVYVDDIIITGNNADALTNLKENLANRFSIKNLGQLKYFLGIEVSRSAKGI 1197
++ L VLVYVDDIII NN A+ LK L + F +++LG LKYFLG+E++RSA GI
Sbjct: 272 ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGI 331
Query: 1198 FLCQRKYILDILKDSGLTAVKPISFPMEQHLKLRPTDGNPLPDPSPYRRLIGRLLYLTVT 1257
+CQRKY LD+L ++GL KP S PM+ + G D YRRLIGRL+YL +T
Sbjct: 332 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQIT 391
Query: 1258 RPDITYAVNTLSQFMQAPHTAHHDAALRILRYLKGTIGHGILLSATSSLHLRGYTDADWA 1317
R DI++AVN LSQF +AP AH A ++IL Y+KGT+G G+ S+ + + L+ ++DA +
Sbjct: 392 RLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQ 451
Query: 1318 GCPTTRRSTTGYFTILGDSPISWKSKKQPTISRSSAEAEYRALANLTAEIQWLKYLFDDL 1377
C TRRST GY LG S ISWKSKKQ +S+SSAEAEYRAL+ T E+ WL F +L
Sbjct: 452 SCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL 511
Query: 1378 RIPFSDPVKVFCDSQTAMHIAGNPIFHERTKHIELDCHFIRER 1420
++P S P +FCD+ A+HIA N +FHERTKHIE DCH +RER
Sbjct: 512 QLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 568 bits (1463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 268/523 (51%), Positives = 363/523 (69%), Gaps = 9/523 (1%)
Query: 903 RNCHPPVKYKDYICSTMTTSIMEGPKYPLNHFISFDQFSPTHKIFLTNVLGTEEPTSFKQ 962
R P +DY C ++ + + + ++ F+S+++ SP + FL + +EP+++ +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTI----HDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNE 91
Query: 963 AMKSQEWQEAMAKEVSALESNNTWSLTTLPPNKSAIGCKWVYKIKYKPDGSIERYKARLV 1022
A + W AM E+ A+E+ +TW + TLPPNK IGCKWVYKIKY DG+IERYKARLV
Sbjct: 92 AKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLV 151
Query: 1023 AKGYTQVEGIDYHDTFAPVAKLVTVRVLLSLAAIKEWPLHQMDVNNAFLQGDLNEEVYMK 1082
AKGYTQ EGID+ +TF+PV KL +V+++L+++AI + LHQ+D++NAFL GDL+EE+YMK
Sbjct: 152 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 211
Query: 1083 IPPGFA-KSGD----NRVCRLHKSLYGLKQASRQWFAKFSTALLDEGFKQSLADYSLFTY 1137
+PPG+A + GD N VC L KS+YGLKQASRQWF KFS L+ GF QS +D++ F
Sbjct: 212 LPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLK 271
Query: 1138 HKGSVSLFVLVYVDDIIITGNNADALTNLKENLANRFSIKNLGQLKYFLGIEVSRSAKGI 1197
++ L VLVYVDDIII NN A+ LK L + F +++LG LKYFLG+E++RSA GI
Sbjct: 272 ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGI 331
Query: 1198 FLCQRKYILDILKDSGLTAVKPISFPMEQHLKLRPTDGNPLPDPSPYRRLIGRLLYLTVT 1257
+CQRKY LD+L ++GL KP S PM+ + G D YRRLIGRL+YL +T
Sbjct: 332 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQIT 391
Query: 1258 RPDITYAVNTLSQFMQAPHTAHHDAALRILRYLKGTIGHGILLSATSSLHLRGYTDADWA 1317
R DI++AVN LSQF +AP AH A ++IL Y+KGT+G G+ S+ + + L+ ++DA +
Sbjct: 392 RLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQ 451
Query: 1318 GCPTTRRSTTGYFTILGDSPISWKSKKQPTISRSSAEAEYRALANLTAEIQWLKYLFDDL 1377
C TRRST GY LG S ISWKSKKQ +S+SSAEAEYRAL+ T E+ WL F +L
Sbjct: 452 SCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL 511
Query: 1378 RIPFSDPVKVFCDSQTAMHIAGNPIFHERTKHIELDCHFIRER 1420
++P S P +FCD+ A+HIA N +FHERTKHIE DCH +RER
Sbjct: 512 QLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 221 bits (563), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 154/227 (67%), Gaps = 3/227 (1%)
Query: 1144 LFVLVYVDDIIITGNNADALTNLKENLANRFSIKNLGQLKYFLGIEVSRSAKGIFLCQRK 1203
+++L+YVDDI++TG++ L L L++ FS+K+LG + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1204 YILDILKDSGLTAVKPISFPMEQHLKLRPTDGNP-LPDPSPYRRLIGRLLYLTVTRPDIT 1262
Y IL ++G+ KP+S P+ LKL + PDPS +R ++G L YLT+TRPDI+
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118
Query: 1263 YAVNTLSQFMQAPHTAHHDAALRILRYLKGTIGHGILLSATSSLHLRGYTDADWAGCPTT 1322
YAVN + Q M P A D R+LRY+KGTI HG+ + S L+++ + D+DWAGC +T
Sbjct: 119 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 178
Query: 1323 RRSTTGYFTILGDSPISWKSKKQPTISRSSAEAEYRALANLTAEIQW 1369
RRSTTG+ T LG + ISW +K+QPT+SRSS E EYRALA AE+ W
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
Length = 237
Score = 120 bits (301), Expect = 4e-30, Method: Composition-based stats.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 16 NEPYVVHPS-DNPSSVLISPLLTG-DNYGTWVRGITMALSAKDKMGFVDGSIVKPT--SP 71
+ PY + P +PS I L DNY W L K GF+DG++ KP SP
Sbjct: 15 DSPYYLPPDIHHPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSP 74
Query: 72 DEYRSWKRCNDLVSSWILNSIGSDIRSSVLYAESAHEIWIDLRDRFTQSNAPKVYQLKHS 131
Y+ W++CN +V W++NS+ + SV+YAE+AH++W DLR F K+YQL+
Sbjct: 75 -LYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRR 133
Query: 132 ISSLKQEGSDISNYFTRLKSLWDELDSILPQETCICGA-----GKVIVERHNQDRAMEFL 186
+++L+Q G + YF +L +W EL P C CG K E +++ EFL
Sbjct: 134 LATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEAREKEQRYEFL 193
Query: 187 QG--LHDRYSNIRSQILLMDPFPSTTRIYNLVRQEE 220
G L+ + + ++I+ P PS + +V+ E
Sbjct: 194 MGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAE 229
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 104 bits (260), Expect = 4e-26, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 60/82 (73%)
Query: 1252 LYLTVTRPDITYAVNTLSQFMQAPHTAHHDAALRILRYLKGTIGHGILLSATSSLHLRGY 1311
+YLT+TRPD+T+AVN LSQF A TA A ++L Y+KGT+G G+ SATS L L+ +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1312 TDADWAGCPTTRRSTTGYFTIL 1333
D+DWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82