BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2290.1
(1297 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 180 8e-46
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 180 8e-46
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 159 9e-44
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 123 8e-32
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 87 5e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 119/180 (66%), Gaps = 5/180 (2%)
Query: 937 AYLSILHLPTAPSTYKEAAKSIEWCKAMNDEFLALQQNKTWSLVPYDSKMNVLGCKWVYK 996
++L + PSTY EA + + WC AM+DE A++ TW + +GCKWVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 997 LKQKSDGTIERYKARLVAKGFHQQEGVDFAETFSPVVKASTIRLILTIAVTKSWYTKQLD 1056
+K SDGTIERYKARLVAKG+ QQEG+DF ETFSPV K ++++LIL I+ ++ QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 1057 VSNAFLHGVLEENVYMIQPPGFI----DKAKEDYVCHLHKALYGLKQAPRD-LLPFSFSM 1111
+SNAFL+G L+E +YM PPG+ D + VC+L K++YGLKQA R L FS ++
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 110/168 (65%)
Query: 1123 GVELSSPTEYRSLVGALQYLTLTRPDISFAVNYIAQFMHKPTEKHLVIVKKILRYLKGSV 1182
G + YR L+G L YL +TR DISFAVN ++QF P H V KIL Y+KG+V
Sbjct: 369 GGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 1183 GSGIKISSGDLSMLSAYSDSDWAGCPDSRKSTGGFCVFLGSSLISWSSKKQATVAKSSTE 1242
G G+ SS L +SD+ + C D+R+ST G+C+FLG+SLISW SKKQ V+KSS E
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 1243 VEYKSLSTTTTELVWISYLMDELRFPLKKPYLLHCDNISAKHLASNPI 1290
EY++LS T E++W++ EL+ PL KP LL CDN +A H+A+N +
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 119/180 (66%), Gaps = 5/180 (2%)
Query: 937 AYLSILHLPTAPSTYKEAAKSIEWCKAMNDEFLALQQNKTWSLVPYDSKMNVLGCKWVYK 996
++L + PSTY EA + + WC AM+DE A++ TW + +GCKWVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 997 LKQKSDGTIERYKARLVAKGFHQQEGVDFAETFSPVVKASTIRLILTIAVTKSWYTKQLD 1056
+K SDGTIERYKARLVAKG+ QQEG+DF ETFSPV K ++++LIL I+ ++ QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 1057 VSNAFLHGVLEENVYMIQPPGFI----DKAKEDYVCHLHKALYGLKQAPRD-LLPFSFSM 1111
+SNAFL+G L+E +YM PPG+ D + VC+L K++YGLKQA R L FS ++
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 110/168 (65%)
Query: 1123 GVELSSPTEYRSLVGALQYLTLTRPDISFAVNYIAQFMHKPTEKHLVIVKKILRYLKGSV 1182
G + YR L+G L YL +TR DISFAVN ++QF P H V KIL Y+KG+V
Sbjct: 369 GGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 1183 GSGIKISSGDLSMLSAYSDSDWAGCPDSRKSTGGFCVFLGSSLISWSSKKQATVAKSSTE 1242
G G+ SS L +SD+ + C D+R+ST G+C+FLG+SLISW SKKQ V+KSS E
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 1243 VEYKSLSTTTTELVWISYLMDELRFPLKKPYLLHCDNISAKHLASNPI 1290
EY++LS T E++W++ EL+ PL KP LL CDN +A H+A+N +
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 159 bits (403), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 99/131 (75%)
Query: 1129 PTEYRSLVGALQYLTLTRPDISFAVNYIAQFMHKPTEKHLVIVKKILRYLKGSVGSGIKI 1188
P+++RS+VGALQYLTLTRPDIS+AVN + Q MH+PT ++K++LRY+KG++ G+ I
Sbjct: 97 PSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYI 156
Query: 1189 SSGDLSMLSAYSDSDWAGCPDSRKSTGGFCVFLGSSLISWSSKKQATVAKSSTEVEYKSL 1248
+ A+ DSDWAGC +R+ST GFC FLG ++ISWS+K+Q TV++SSTE EY++L
Sbjct: 157 HKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216
Query: 1249 STTTTELVWIS 1259
+ T EL W S
Sbjct: 217 ALTAAELTWSS 227
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 123 bits (308), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%)
Query: 948 PSTYKEAAKSIEWCKAMNDEFLALQQNKTWSLVPYDSKMNVLGCKWVYKLKQKSDGTIER 1007
P + A K WC+AM +E AL +NKTW LVP N+LGCKWV+K K SDGT++R
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 1008 YKARLVAKGFHQQEGVDFAETFSPVVKASTIRLILTIA 1045
KARLVAKGFHQ+EG+ F ET+SPVV+ +TIR IL +A
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 87.0 bits (214), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 1141 YLTLTRPDISFAVNYIAQFMHKPTEKHLVIVKKILRYLKGSVGSGIKISSGDLSMLSAYS 1200
YLT+TRPD++FAVN ++QF + V K+L Y+KG+VG G+ S+ L A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1201 DSDWAGCPDSRKSTGGFC 1218
DSDWA CPD+R+S GFC
Sbjct: 62 DSDWASCPDTRRSVTGFC 79