BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2340.1
(252 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 186 1e-53
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 186 1e-53
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 158 1e-47
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 79 1e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 186 bits (472), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 138/234 (58%), Gaps = 3/234 (1%)
Query: 1 MANSKPSTTPVIIGSKLSKFDGDPIDNPQDFRCLVGALHYLTLTRPDISYAVNQVSKFMN 60
+ KPS+ P+ S G + + +R L+G L YL +TR DIS+AVN++S+F
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407
Query: 61 SPTMTHLIAAKRILRYLKGTIKNGLGFRRATSLPLIGFSDADWAGSPDDRRSTSGYGIFL 120
+P + H A +IL Y+KGT+ GL + + L FSDA + D RRST+GY +FL
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 121 GPNLIAWASKTQPTVARSSTEAEYRAVSHATAEIIWVQNMLTELGIPTPSIPIVYCDNIS 180
G +LI+W SK Q V++SS EAEYRA+S AT E++W+ EL +P +++CDN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 181 TTYLAINPILHTRTKHASIDFHFVREK-VKQGQLKVSYIPGDDQLADIFTRGLS 233
++A N + H RTKH D H VRE+ V Q L S+ D+Q D FT LS
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 186 bits (472), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 138/234 (58%), Gaps = 3/234 (1%)
Query: 1 MANSKPSTTPVIIGSKLSKFDGDPIDNPQDFRCLVGALHYLTLTRPDISYAVNQVSKFMN 60
+ KPS+ P+ S G + + +R L+G L YL +TR DIS+AVN++S+F
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407
Query: 61 SPTMTHLIAAKRILRYLKGTIKNGLGFRRATSLPLIGFSDADWAGSPDDRRSTSGYGIFL 120
+P + H A +IL Y+KGT+ GL + + L FSDA + D RRST+GY +FL
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 121 GPNLIAWASKTQPTVARSSTEAEYRAVSHATAEIIWVQNMLTELGIPTPSIPIVYCDNIS 180
G +LI+W SK Q V++SS EAEYRA+S AT E++W+ EL +P +++CDN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 181 TTYLAINPILHTRTKHASIDFHFVREK-VKQGQLKVSYIPGDDQLADIFTRGLS 233
++A N + H RTKH D H VRE+ V Q L S+ D+Q D FT LS
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 158 bits (399), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 1 MANSKPSTTPVIIGSKLSKFDGDPIDNPQDFRCLVGALHYLTLTRPDISYAVNQVSKFMN 60
M + KP +TP+ + S +P DFR +VGAL YLTLTRPDISYAVN V + M+
Sbjct: 71 MLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 129
Query: 61 SPTMTHLIAAKRILRYLKGTIKNGLGFRRATSLPLIGFSDADWAGSPDDRRSTSGYGIFL 120
PT+ KR+LRY+KGTI +GL + + L + F D+DWAG RRST+G+ FL
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189
Query: 121 GPNLIAWASKTQPTVARSSTEAEYRAVSHATAEIIW 156
G N+I+W++K QPTV+RSSTE EYRA++ AE+ W
Sbjct: 190 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 79.3 bits (194), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 40 YLTLTRPDISYAVNQVSKFMNSPTMTHLIAAKRILRYLKGTIKNGLGFRRATSLPLIGFS 99
YLT+TRPD+++AVN++S+F ++ + A ++L Y+KGT+ GL + + L L F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 100 DADWAGSPDDRRSTSGY 116
D+DWA PD RRS +G+
Sbjct: 62 DSDWASCPDTRRSVTGF 78