BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2380.1
(129 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 45 3e-06
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 44 1e-05
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 41 9e-05
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 45.4 bits (106), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 22 EECECRTILYAMQWACDLCIQYIQIESDNQNLIRCL--YNSNASIQWKSEKHMDEILALK 79
EE EC T+++A+Q + + + E DNQ + R + +SN +Q +D I +
Sbjct: 156 EEAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQ----HFLDTIQSWI 211
Query: 80 DKFESIIFTHTTRQNNSQADILAK 103
FESI F+ R+ N AD LAK
Sbjct: 212 PSFESIEFSFKHREQNGCADFLAK 235
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 43.5 bits (101), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 20 NPEECECRTILYAMQWACDLCIQYIQIESDNQ---NLIRCLYNSNASIQWKSEKHMDEIL 76
N ECE + +L AMQ + I E DN+ +LI L + W + +IL
Sbjct: 552 NALECEFQALLMAMQHCWSKGYRRICFEGDNKEMFDLINGLKMHFGAFNW-----IRDIL 606
Query: 77 ALKDKFESIIFTHTTRQNNSQADILAKWSRQNQCRRSWHSFQDFANYF 124
KFE F T RQNN ADILA+ Q+Q FAN+F
Sbjct: 607 WWASKFEQTQFQWTNRQNNKPADILARTPLQHQFL--------FANHF 646
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 40.8 bits (94), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 19 QNPEECECRTILYAMQWACDLCIQYIQIESDNQNLIRCLYNSNASIQWKSEKHMDEILAL 78
Q +E EC +++A+Q A DL + ++ E DN + R + N + + + +++ I
Sbjct: 78 QTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRLRY--YLEFIQQW 135
Query: 79 KDKFESIIFTHTTRQNNSQADILAKWSRQNQCRRSWHSF 117
F ++ FT R+ N D+LAK + N + + F
Sbjct: 136 SKAFTTVKFTFRHREQNVCVDVLAKKAVANHINHTLYHF 174