BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2410.1
(114 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G41840.1 | Ribosomal protein S5 family protein | Chr2:1746001... 119 3e-34
AT1G59359.1 | Ribosomal protein S5 family protein | Chr1:2184253... 119 6e-34
AT1G58983.1 | Ribosomal protein S5 family protein | Chr1:2180627... 119 6e-34
AT1G58684.1 | Ribosomal protein S5 family protein | Chr1:2177002... 119 6e-34
AT1G58380.1 | Ribosomal protein S5 family protein | Chr1:2168911... 119 7e-34
>AT2G41840.1 | Ribosomal protein S5 family protein |
Chr2:17460016-17461398 REVERSE LENGTH=285 | 201606
Length = 285
Score = 119 bits (299), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG+DDVF S RGSTKTL NFVKATFDCLQKTYGFLTP+FW+ETR++RSP+Q
Sbjct: 202 RVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 261
Query: 92 EFTDLLAKPTKAL 104
E TD LA +KAL
Sbjct: 262 EHTDFLA--SKAL 272
>AT1G59359.1 | Ribosomal protein S5 family protein |
Chr1:21842537-21843733 REVERSE LENGTH=284 | 201606
Length = 284
Score = 119 bits (297), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG+DDVF S RGSTKTL NFVKATFDCLQKTYGFLTP+FW+ETR++RSP+Q
Sbjct: 201 RVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 260
Query: 92 EFTDLLAKPTKAL 104
E TD L+ TKA+
Sbjct: 261 EHTDFLS--TKAV 271
>AT1G58983.1 | Ribosomal protein S5 family protein |
Chr1:21806279-21807475 REVERSE LENGTH=284 | 201606
Length = 284
Score = 119 bits (297), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG+DDVF S RGSTKTL NFVKATFDCLQKTYGFLTP+FW+ETR++RSP+Q
Sbjct: 201 RVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 260
Query: 92 EFTDLLAKPTKAL 104
E TD L+ TKA+
Sbjct: 261 EHTDFLS--TKAV 271
>AT1G58684.1 | Ribosomal protein S5 family protein |
Chr1:21770021-21771217 REVERSE LENGTH=284 | 201606
Length = 284
Score = 119 bits (297), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG+DDVF S RGSTKTL NFVKATFDCLQKTYGFLTP+FW+ETR++RSP+Q
Sbjct: 201 RVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 260
Query: 92 EFTDLLAKPTKAL 104
E TD L+ TKA+
Sbjct: 261 EHTDFLS--TKAV 271
>AT1G58380.1 | Ribosomal protein S5 family protein |
Chr1:21689115-21690085 FORWARD LENGTH=284 | 201606
Length = 284
Score = 119 bits (297), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG+DDVF S RGSTKTL NFVKATFDCLQKTYGFLTP+FW+ETR++RSP+Q
Sbjct: 201 RVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 260
Query: 92 EFTDLLAKPTKAL 104
E TD L+ TKA+
Sbjct: 261 EHTDFLS--TKAV 271