BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2430.1
(325 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63500.3 | fibronectin type III domain protein (DUF1423) | Ch... 60 2e-09
AT3G63500.2 | fibronectin type III domain protein (DUF1423) | Ch... 60 2e-09
AT3G63500.1 | fibronectin type III domain protein (DUF1423) | Ch... 59 2e-09
>AT3G63500.3 | fibronectin type III domain protein (DUF1423) |
Chr3:23446331-23449991 REVERSE LENGTH=1162 | 201606
Length = 1162
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 211 FRSNSQRELEQLVMGGAGFVEKIM--IVSEPIPVMASRVQEMTDQSLAYLKKSTHKMIMH 268
F S S + L GG FVE ++ I+S+ +PVM R EM +++ LK++ +M+++
Sbjct: 681 FYSGSNSWITGLEAGGHDFVETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN 740
Query: 269 EEKRAQLNLLQKAVQHRTDFTL 290
+K QL Q A+Q+RTD TL
Sbjct: 741 MDKNVQLGAFQDALQNRTDITL 762
>AT3G63500.2 | fibronectin type III domain protein (DUF1423) |
Chr3:23446331-23449991 REVERSE LENGTH=1162 | 201606
Length = 1162
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 211 FRSNSQRELEQLVMGGAGFVEKIM--IVSEPIPVMASRVQEMTDQSLAYLKKSTHKMIMH 268
F S S + L GG FVE ++ I+S+ +PVM R EM +++ LK++ +M+++
Sbjct: 681 FYSGSNSWITGLEAGGHDFVETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN 740
Query: 269 EEKRAQLNLLQKAVQHRTDFTL 290
+K QL Q A+Q+RTD TL
Sbjct: 741 MDKNVQLGAFQDALQNRTDITL 762
>AT3G63500.1 | fibronectin type III domain protein (DUF1423) |
Chr3:23446331-23449166 REVERSE LENGTH=887 | 201606
Length = 887
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 211 FRSNSQRELEQLVMGGAGFVEKIM--IVSEPIPVMASRVQEMTDQSLAYLKKSTHKMIMH 268
F S S + L GG FVE ++ I+S+ +PVM R EM +++ LK++ +M+++
Sbjct: 406 FYSGSNSWITGLEAGGHDFVETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN 465
Query: 269 EEKRAQLNLLQKAVQHRTDFTL 290
+K QL Q A+Q+RTD TL
Sbjct: 466 MDKNVQLGAFQDALQNRTDITL 487