BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2490.1
(591 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 134 6e-33
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1... 76 1e-14
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 57 3e-08
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 134 bits (337), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 179/379 (47%), Gaps = 38/379 (10%)
Query: 174 NIISNLEMTDMGFQGNPYTWSNKQFGHNLIQERLDRALANQPWLQKYNNS-GITHLEGIR 232
N + + ++ D+ +G YTWSN Q N I +LDRA+AN W + ++ + L G+
Sbjct: 254 NCLRDSDLVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV- 311
Query: 233 SDHLP--ILLSSFEPHNKLPKPFKFIRTWMSHPDCQGFIADKWYSKIFPQTDIQANLTHL 290
SDH P I+L + +K K F++ +HP + W +I + +++ L
Sbjct: 312 SDHSPCIIILENLPKRSK--KCFRYFSFLSTHPTFLVSLTVAWEEQI----PVGSHMFSL 365
Query: 291 SKHLSQ-------WNKQVFGNIENQINHIVASL-----QLCSGHNEYIGLSKRLEELYKL 338
+HL N+Q FGNI+++ + SL QL + ++ + R+E + +
Sbjct: 366 GEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLF---RVEHVARK 422
Query: 339 Q--------ESMWKEKSRNNFVTLGDKNTKYFHSQAIHRNRNNRILAIKDNLGNWQENIN 390
+ ES +++KSR ++ GD NT++FH + N I ++ + EN+
Sbjct: 423 KWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVT 482
Query: 391 DIQSTVSAHLLNISTMDNTTIN----QHISDLFTASISDSQNIELTRIPDKEEIEEAIKH 446
++ + A+ ++ D+ + Q I D+ +D+ L+ +P +EI A+
Sbjct: 483 QVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFA 542
Query: 447 LKKDAAPGPDGFPPFFFQSNWDTINQDIYLMVTNFFETANLPEGTNHTNICLIPKTIAPQ 506
+ ++ APGPD F FF +W + V FF T +L + N T I LIPK
Sbjct: 543 MPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVD 602
Query: 507 TPADYRPISLLNTTYKIIT 525
+ +RP+S YKIIT
Sbjct: 603 QLSMFRPVSCCTVVYKIIT 621
>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
Length = 376
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 528 LADRFKDTLTNIISPFQSAFVPGRQISDNIIMAQEIIHSFRKMKGNKGYFGLKLDMSKAF 587
+ +R K +TN+I P Q++F+PGR +DNI+ QE +HS R+ KG KG+ LKLD+ KA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 588 DRI 590
DRI
Sbjct: 61 DRI 63
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 19/231 (8%)
Query: 136 NPGPDMPWMIIGDLNIILDPQDKSG---GNVNSNSFTPKVNNIISNLEMTDMGFQGNPYT 192
+P + PW+++GD N I + N++ + + + ++ D+ +G YT
Sbjct: 115 SPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLE-DLQACMRDSDLVDLPCRGVLYT 173
Query: 193 WSNKQFGHNLIQERLDRALANQPWLQKYNNSGITHLEGIRSDHLP--ILLSSFEPHNKLP 250
WSN Q N I +LDRA+ N WL + + SDH ++L++ P +K
Sbjct: 174 WSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLSK-K 231
Query: 251 KPFKFIRTWMSHPDCQGFIADKWYSKIFPQTDIQANLTHLSKHLSQWNKQVFGNIENQIN 310
K FK+ +HPD I W +I + + + L + L + K G +
Sbjct: 232 KSFKYFSFLSTHPDFISSILAAWQKEI----AVGSFMFSLGELLKEAKKACRGLNRRGFS 287
Query: 311 HIVASLQLCSGHNEYIGLSKRLEE-----LYKLQESMWKEKSRNNFVTLGD 356
+I A QL S ++++ ++ + ES +K+KSR ++ GD
Sbjct: 288 NIQA--QLMSNPSDFLFRAEHVARKNWNFFAAALESFYKQKSRIKWLKEGD 336