BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2570.1
(480 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32420.1 | F-box and associated interaction domains-containin... 74 4e-14
AT4G19940.1 | F-box and associated interaction domains-containin... 72 3e-13
AT1G70970.1 | F-box and associated interaction domains-containin... 68 5e-12
AT5G65850.1 | F-box and associated interaction domains-containin... 62 4e-10
AT2G15640.1 | F-box family protein | Chr2:6816792-6818072 REVERS... 62 4e-10
>AT1G32420.1 | F-box and associated interaction domains-containing
protein | Chr1:11701995-11702903 FORWARD LENGTH=302 |
201606
Length = 302
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 134/327 (40%), Gaps = 78/327 (23%)
Query: 48 LEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPP 107
L EIL +LP KSL RF+ V K+W +I + FID + R T+ PPP
Sbjct: 41 LTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQ------------PPP 88
Query: 108 RKLIEDPDYVEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVISKPVNGLIS 167
R + + +P F I + + + K L +SSY+ V GLI
Sbjct: 89 RDIKLIFHHQVLYPGPHFFIFSST-YPQNTDKESLTTR------ASSYHY----VRGLIC 137
Query: 168 LIESYDEHVARIYSTSTGQVSPWFQASSIAVGEEHVALP--NRYA------FGFDPATNE 219
S+ IY+ +T Q + +P NRY FG+DP N+
Sbjct: 138 CW-SHCPTTVDIYNPTTRQ---------------YYTVPDTNRYQYIETCFFGYDPVENQ 181
Query: 220 HKLVCVLTIRSDDRVFKYFL----GGVLTIGRQCNNNIWRRIKEFVPYSLNDDYVYVNGV 275
+K++ + KY++ V T+G WR I+ + L D V +NGV
Sbjct: 182 YKVMVLP---------KYYMEESPCQVFTVGDPIEKP-WRDIQGIGVHFLLKDAVCINGV 231
Query: 276 IYWSNSSLDIWASRSGYRPVYLVAFDVGNEKFRTITIPDYILDHPRVSGRFKKIAQLFEV 335
IY+ A+ +LV+FDV +EKF + P + DHP L
Sbjct: 232 IYYQ-------ATNEYGSTYFLVSFDVRSEKFNHVKAPKILTDHP---------CTLINY 275
Query: 336 DGNLAMVVKLNDCMFNMYIYEDADYKD 362
G L +++ + +++ EDA+ K
Sbjct: 276 QGKLGLIMCCKKGL-EIWVMEDAEKKQ 301
>AT4G19940.1 | F-box and associated interaction domains-containing
protein | Chr4:10806195-10807430 FORWARD LENGTH=411 |
201606
Length = 411
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 181/417 (43%), Gaps = 78/417 (18%)
Query: 48 LEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPP 107
L EIL RLP KSL RFK+V K W LI + F + L K P RLF+ +
Sbjct: 39 LVIEILTRLPAKSLMRFKSVSKLWSSLICS-RNFTNRLL---KLSSPPRLFMCLSS---- 90
Query: 108 RKLIEDPDYVEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVISKPVNGLIS 167
D ++ K ++ + + T V+D + IS GL+
Sbjct: 91 ----SDNSHL-----KTVLLSLSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMC 141
Query: 168 LIESYDEHVARIYSTSTGQ--VSPWFQASSIAVGEEHVALPNRYAFGFDPATNEHKLVCV 225
L++ A+IY+T+T Q V P + S+I + EEH + Y G DP +++K+VC+
Sbjct: 142 LVKKSS---AQIYNTTTRQLVVLPDIEESTI-LAEEHKSKKIMYHIGHDPVYDQYKVVCI 197
Query: 226 LTIRSDDRVFKY-FLGG--VLTIGRQCNNNIWRRIK-EFVPYSLNDDYVYVNGVIYWSNS 281
++ R+ D V +Y FL VL + + + WR+I ++ P+ + ++G +++
Sbjct: 198 VS-RASDEVEEYTFLSEHWVLLLEGEGSRR-WRKISCKYPPHVPLGQGLTLSGRMHYLA- 254
Query: 282 SLDIWASRSGYRPVYLVAFDVGNEKFRTITIPDYILDHPRVSGRFKKIAQLFEVDGNLAM 341
W S R LV FD +E+F + +P I F K L E G +A+
Sbjct: 255 ----WVRVSDNR--VLVIFDTHSEEFSMLQVPGDI---------FWKYNGLLEYGGKIAI 299
Query: 342 V--VKLN-DCMFNMYIYEDADYKDKDEKINGTSTSASPKNGRWSEAIRITLPFYMRYSRT 398
+ K++ + + +++ ED + WS I + P ++ +
Sbjct: 300 LNYTKVDIEGVMELWVVEDEE------------------KNLWSSKILVVNPLQLQMVNS 341
Query: 399 VKFHTFIGS---DDKILVTSSIWDLERRGWEKKECLSISCYNWKKDTWTKVDVSGVP 452
+ T +G+ + ILV G E K +I Y+ +K+ K+++ G P
Sbjct: 342 IISLTVLGTTRNGEVILVP---------GPEDKTVFNILLYDLQKNHIRKIEIKGGP 389
>AT1G70970.1 | F-box and associated interaction domains-containing
protein | Chr1:26759834-26761042 FORWARD LENGTH=402 |
201606
Length = 402
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 48 LEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFIV--VPQPP 105
L+ EI++ LP+KSL RF V K+W +I + +QF L+L R TR P +F+V + P
Sbjct: 14 LQTEIMSWLPLKSLLRFVIVSKKWASII-RGEQFKALYLRRSMTR-PRLMFMVRRIATLP 71
Query: 106 PPRKLIEDPDYVEFWPYKEFHITADILF----EEENTKLKLVVDTIREVDSSSYNVISKP 161
P +++ + + + + LF +E+ +R +++Y +S+P
Sbjct: 72 PEPEMVWFQSFCKEERCIPGQLEVEFLFHSVYQEKIPYFSSGQQQLRVPPNTNYTSVSQP 131
Query: 162 VNGLISLIESYDEHVARIYSTSTGQVSPWFQASSIAVGEEHVALPNRYAFGFDPATNEHK 221
+ GLI L +S + T + P QA A + G+D ATN K
Sbjct: 132 IGGLICL-QSETKFALCNPGTKKSRALPDIQAHEKAFITSFL--------GYDEATNVFK 182
Query: 222 LVCVLTIRSDD---RVFKYFLGGVLTIGRQCNNNIWRRI----KEFVPYSLNDDYVYVNG 274
++C+ + + + RV++Y VLT+ + WR I K+ P + + G
Sbjct: 183 VLCLTMVWAHEPSKRVYEY---QVLTVESGVESCSWRGITCKEKDHTPETQG---LCKGG 236
Query: 275 VIYWSNSSLDIWASRSGYRPVYLVAFDVGNEKFRTITIPDYI 316
V+Y+ S S +RP+ +++F+V +++F I +PD +
Sbjct: 237 VLYYGARST------SDHRPL-VMSFNVRSQEFTAIELPDQL 271
>AT5G65850.1 | F-box and associated interaction domains-containing
protein | Chr5:26346317-26347495 FORWARD LENGTH=392 |
201606
Length = 392
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 77/326 (23%)
Query: 51 EILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPPRKL 110
EIL RLP KS+A + V K W +I + Q F +L L R R P LF
Sbjct: 42 EILLRLPAKSIATCRCVSKLWISVICR-QDFTELFLTRSLHR-PQLLFCCK--------- 90
Query: 111 IEDPDYVEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNV---ISKPVNGLIS 167
+D + LF + +L+ + + ++++ IS+PVNGLI
Sbjct: 91 -KDGN----------------LFFFSSPQLQNPYENSSAISLKNFSLCYKISRPVNGLIC 133
Query: 168 LI-ESYDEHVARIYSTSTGQVSPWFQASSIAVGEEHVALPNRYAFGFDPATNEHKLVCVL 226
+ +E V I + STG + ++G P+R+ F ++P + K++ L
Sbjct: 134 FKRKEMNETVTVICNPSTGHTLSLPKPMKTSIG------PSRF-FVYEPIQKQFKVL--L 184
Query: 227 TIRSDDRVFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLNDDYVYVNGVIYWSNSSLDIW 286
+ +SD+ VLT+G WR I+ +P+ L + +NGV+Y+ +L
Sbjct: 185 SYKSDEH-------QVLTLGT--GELSWRIIECSMPHILGMSEICINGVLYYPAINL--- 232
Query: 287 ASRSGYRPVYLVAFDVGNEKFRTITIPDYILDHPRVSGRFKKIAQ---LFEVDGNLAMVV 343
S Y +V FDV +EKFR IT+ + F K A L +G LA +V
Sbjct: 233 -SSGDY---IIVCFDVRSEKFRFITVME----------EFIKAAHDGTLINYNGKLASLV 278
Query: 344 KLNDCMFN-------MYIYEDADYKD 362
C + +++ +DA+ K+
Sbjct: 279 SERYCFVDGRSKSIELWVLQDAEKKE 304
>AT2G15640.1 | F-box family protein | Chr2:6816792-6818072 REVERSE
LENGTH=426 | 201606
Length = 426
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 136/347 (39%), Gaps = 63/347 (18%)
Query: 41 SSIDDDCLEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFIV 100
S+I +D L EIL+RLP KS+ARF V K+W + F +L L R T+ P LF +
Sbjct: 4 STITND-LTVEILSRLPAKSVARFHCVSKQWGSIFGS-PYFKELFLTRSSTK-PRLLFAM 60
Query: 101 VPQPPPPR----KLIEDPDYVEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYN 156
+ + + P + + A F + + KL + ++ S
Sbjct: 61 AEKVNEEKNCVWRFFSTPQLENPYEKSSSTLVAAAEFHVKFSPDKLYICHCYDLKYFSIG 120
Query: 157 VISKPVNGLISLIESYDEHVARIYSTSTGQVSPWFQASSIAVGEEHVALPNRYA------ 210
S GLI L E I + +TG+ + LPNRY
Sbjct: 121 YAS----GLIYLYGDRGEATPLICNPTTGR---------------YAILPNRYTYRKAYS 161
Query: 211 -FGFDPATNEHKLVCVLTIRSDDRVFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLND-- 267
FGFDP ++K + + +LT G + WR+I + Y +D
Sbjct: 162 FFGFDPIDKQYKALSIFYPSGPGH------SKILTFG--AGHMKWRKINCPLRYDRHDIK 213
Query: 268 -DYVYVNGVIYWSNSSLDIWASRSGYRPVY-LVAFDVGNEKFRTITIPDYILDHPRVSGR 325
+ + +NGV+Y+ S+ D G Y +V FD+ +EKF I +
Sbjct: 214 SEGICINGVLYYLGSTSDCVKDGHGIVSDYVIVCFDIRSEKFTFIDV------------- 260
Query: 326 FKKIAQLFEVDGNLAMVVKLNDCMFNMYIYEDAD----YKDKDEKIN 368
++ +L G LA++ +D Y D D Y D+ IN
Sbjct: 261 -ERFCRLINYKGKLAVIYWEDDVDIYKLYYSDVDEYVEYNINDDDIN 306