BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2580.1
(129 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13450.2 | delta subunit of Mt ATP synthase | Chr5:4310558-43... 111 9e-32
AT5G13450.1 | delta subunit of Mt ATP synthase | Chr5:4310558-43... 112 2e-31
>AT5G13450.2 | delta subunit of Mt ATP synthase |
Chr5:4310558-4311941 REVERSE LENGTH=190 | 201606
Length = 190
Score = 111 bits (278), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 59 PLPPDEEKQLKETLQEIIGHGKKVKLEQKIDPSILGGLVVEFSQKVFDMPIRTRARQMGR 118
PLPP EEK+L ETLQEIIG GKK+ +EQKIDPSI GGL+VEF QKV DM IRTRA+QM R
Sbjct: 120 PLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMER 179
Query: 119 FLRDPINFDSI 129
LR+P++F+++
Sbjct: 180 LLREPVDFNNL 190
>AT5G13450.1 | delta subunit of Mt ATP synthase |
Chr5:4310558-4311941 REVERSE LENGTH=238 | 201606
Length = 238
Score = 112 bits (279), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 59 PLPPDEEKQLKETLQEIIGHGKKVKLEQKIDPSILGGLVVEFSQKVFDMPIRTRARQMGR 118
PLPP EEK+L ETLQEIIG GKK+ +EQKIDPSI GGL+VEF QKV DM IRTRA+QM R
Sbjct: 168 PLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMER 227
Query: 119 FLRDPINFDSI 129
LR+P++F+++
Sbjct: 228 LLREPVDFNNL 238