BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2630.1
(805 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47940.1 | 40S ribosomal protein S27 | Chr5:19409407-19411893... 231 8e-65
>AT5G47940.1 | 40S ribosomal protein S27 | Chr5:19409407-19411893
REVERSE LENGTH=749 | 201606
Length = 749
Score = 231 bits (588), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 223/391 (57%), Gaps = 38/391 (9%)
Query: 15 TNWKVIHGSLNHSLSFETPFSEDTQVES---NTPKDHL--QLVNPPSSNSSAGPCEITIS 69
TNWK++ G+L ++SFE+ F+ + + + + DH+ + + PCEITI+
Sbjct: 14 TNWKLVDGTLIDAISFESSFTANPESDDGIISAAVDHVTKSPLLLLPPVPNGEPCEITIT 73
Query: 70 FSQRHEIRQVYVRSTVRVYEIYYASDEKSCNEYLCTVRCSAAVDGDSTLHESEAEERSTG 129
F+Q HE+RQ+Y+RS+ RVYE+YY + EYLCTVRC A+ + L E +
Sbjct: 74 FAQEHELRQIYIRSSARVYEVYYTKKRRHDKEYLCTVRCGVAIRDEEVLQIPLTESADSK 133
Query: 130 TVEIPAEKSRNGSSNG-TTEDDWIEVKTPDSPFPASSTTTKNNRNGERIVQDLYEATAEI 188
V+ E+ + NG T+EDDW+EVK D N E+ QD YEATAEI
Sbjct: 134 PVKDLIERKVADNGNGRTSEDDWVEVKASDDSL----------LNNEK--QDFYEATAEI 181
Query: 189 SDADPCISITIRLLSLQTPGNIHIEEIYVFGEPVEPSESE-HQGGPSENSAGNSLMAMLV 247
+DA+PC SIT+RLLSLQ ++E+YVF +PV+PSESE + + NS+ +SLMAM +
Sbjct: 182 NDAEPCTSITVRLLSLQDKRCALVDEVYVFADPVDPSESEKEEATGTGNSSSSSLMAMFM 241
Query: 248 PTLLQLSKSRNSTQEKNTSNIIENLKYKDAKSKETRLPNP-NVGNMKQ-QEAQPSIPNGA 305
P LLQLS+ ++ +E+ +++ D KS T +P +GN Q + P + +
Sbjct: 242 PALLQLSRGKDVRKER-------DIQVSD-KSNST---DPVAIGNTDQIGVSSPVLVDTV 290
Query: 306 EKEVDKVNKDSTGQGPEFVNKEISQYSNRIERVLDHLVARVVRLEAFCLRFEEKMLEPIS 365
K+VD + S + + N +E +L+ LV +V +E +RFE++ML+PI+
Sbjct: 291 AKQVDAATRVSGAESKPAIP------CNNVETILNQLVNKVSMIETILIRFEDQMLKPIN 344
Query: 366 NIETKLGRLEKQLEVLTTRSHISEFNPGTRI 396
+I+ +L +EK+LE L +S S+ T+I
Sbjct: 345 SIDARLQLVEKKLEQLGKKSFESDLGFRTKI 375