BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2650.1
(170 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37210.1 | lysine decarboxylase family protein | Chr2:1562425... 207 1e-68
AT5G11950.3 | Putative lysine decarboxylase family protein | Chr... 206 8e-68
AT5G11950.2 | Putative lysine decarboxylase family protein | Chr... 206 8e-68
AT5G11950.1 | Putative lysine decarboxylase family protein | Chr... 206 8e-68
AT2G28305.1 | Putative lysine decarboxylase family protein | Chr... 205 9e-68
>AT2G37210.1 | lysine decarboxylase family protein |
Chr2:15624253-15626834 REVERSE LENGTH=215 | 201606
Length = 215
Score = 207 bits (527), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 132/198 (66%), Gaps = 43/198 (21%)
Query: 16 RRIRFKKICVFCGSRPGFKSTFSEAALELGAKMIS------------------------- 50
++ +F++ICVFCGS G KS++ +AA++LG +++S
Sbjct: 9 QKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDG 68
Query: 51 ------------------GETIGEVKTVADMHERKSEMAKNADAFIALPGGYGTMEELLE 92
GET+GEV+ VADMH+RK+EMAK++DAFIALPGGYGT+EELLE
Sbjct: 69 GRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLE 128
Query: 93 MIAWAQLGIHEKPVGLLNVDGYYNSLLELFDKGVEEGFIEGLAREIVVLADTAEELIIKM 152
+I WAQLGIH+KPVGLLNVDGYYNSLL DK VEEGFI AREI+V A TA+EL+ K+
Sbjct: 129 VITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKL 188
Query: 153 EEYAPVHHKVAPRKSWEV 170
EEYAP H +VA + WE+
Sbjct: 189 EEYAPCHERVATKLCWEM 206
>AT5G11950.3 | Putative lysine decarboxylase family protein |
Chr5:3855072-3856815 FORWARD LENGTH=216 | 201606
Length = 216
Score = 206 bits (523), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 129/200 (64%), Gaps = 43/200 (21%)
Query: 14 QKRRIRFKKICVFCGSRPGFKSTFSEAALELGAKM------------------------- 48
+R RF+KICVFCGS G + FS+AA+ELG ++
Sbjct: 3 DNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVY 62
Query: 49 ------------------ISGETIGEVKTVADMHERKSEMAKNADAFIALPGGYGTMEEL 90
ISGET+G+V+ VADMHERK+ MA+ A+AFIALPGGYGTMEEL
Sbjct: 63 EGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEEL 122
Query: 91 LEMIAWAQLGIHEKPVGLLNVDGYYNSLLELFDKGVEEGFIEGLAREIVVLADTAEELII 150
LEMI W+QLGIH+K VGLLNVDGYYN+LL LFD GVEEGFI+ AR IVV A TA+EL+
Sbjct: 123 LEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELME 182
Query: 151 KMEEYAPVHHKVAPRKSWEV 170
KMEEY P H VA +SW+V
Sbjct: 183 KMEEYTPSHMHVASHESWKV 202
>AT5G11950.2 | Putative lysine decarboxylase family protein |
Chr5:3855072-3856815 FORWARD LENGTH=216 | 201606
Length = 216
Score = 206 bits (523), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 129/200 (64%), Gaps = 43/200 (21%)
Query: 14 QKRRIRFKKICVFCGSRPGFKSTFSEAALELGAKM------------------------- 48
+R RF+KICVFCGS G + FS+AA+ELG ++
Sbjct: 3 DNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVY 62
Query: 49 ------------------ISGETIGEVKTVADMHERKSEMAKNADAFIALPGGYGTMEEL 90
ISGET+G+V+ VADMHERK+ MA+ A+AFIALPGGYGTMEEL
Sbjct: 63 EGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEEL 122
Query: 91 LEMIAWAQLGIHEKPVGLLNVDGYYNSLLELFDKGVEEGFIEGLAREIVVLADTAEELII 150
LEMI W+QLGIH+K VGLLNVDGYYN+LL LFD GVEEGFI+ AR IVV A TA+EL+
Sbjct: 123 LEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELME 182
Query: 151 KMEEYAPVHHKVAPRKSWEV 170
KMEEY P H VA +SW+V
Sbjct: 183 KMEEYTPSHMHVASHESWKV 202
>AT5G11950.1 | Putative lysine decarboxylase family protein |
Chr5:3855072-3856815 FORWARD LENGTH=216 | 201606
Length = 216
Score = 206 bits (523), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 129/200 (64%), Gaps = 43/200 (21%)
Query: 14 QKRRIRFKKICVFCGSRPGFKSTFSEAALELGAKM------------------------- 48
+R RF+KICVFCGS G + FS+AA+ELG ++
Sbjct: 3 DNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVY 62
Query: 49 ------------------ISGETIGEVKTVADMHERKSEMAKNADAFIALPGGYGTMEEL 90
ISGET+G+V+ VADMHERK+ MA+ A+AFIALPGGYGTMEEL
Sbjct: 63 EGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEEL 122
Query: 91 LEMIAWAQLGIHEKPVGLLNVDGYYNSLLELFDKGVEEGFIEGLAREIVVLADTAEELII 150
LEMI W+QLGIH+K VGLLNVDGYYN+LL LFD GVEEGFI+ AR IVV A TA+EL+
Sbjct: 123 LEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELME 182
Query: 151 KMEEYAPVHHKVAPRKSWEV 170
KMEEY P H VA +SW+V
Sbjct: 183 KMEEYTPSHMHVASHESWKV 202
>AT2G28305.1 | Putative lysine decarboxylase family protein |
Chr2:12081186-12084307 FORWARD LENGTH=213 | 201606
Length = 213
Score = 205 bits (522), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 129/195 (66%), Gaps = 43/195 (22%)
Query: 19 RFKKICVFCGSRPGFKSTFSEAALELGAKMIS---------------------------- 50
+FK+ICVFCGS G K ++ +AA+ELG +++S
Sbjct: 6 KFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRH 65
Query: 51 ---------------GETIGEVKTVADMHERKSEMAKNADAFIALPGGYGTMEELLEMIA 95
GET+GEVK VADMH+RK+EMAK++DAFIALPGGYGT+EELLE+I
Sbjct: 66 VIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVIT 125
Query: 96 WAQLGIHEKPVGLLNVDGYYNSLLELFDKGVEEGFIEGLAREIVVLADTAEELIIKMEEY 155
WAQLGIH+KPVGLLNV+GYYNSLL DK VEEGFI AR I+V A +A+EL+ K+E+Y
Sbjct: 126 WAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKLEDY 185
Query: 156 APVHHKVAPRKSWEV 170
P H KVA +KSWE+
Sbjct: 186 VPRHEKVASKKSWEM 200