BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2660.1
(1044 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 419 e-129
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 419 e-129
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 256 2e-78
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 122 1e-31
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 77 1e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 419 bits (1077), Expect = e-129, Method: Compositional matrix adjust.
Identities = 210/517 (40%), Positives = 312/517 (60%), Gaps = 10/517 (1%)
Query: 533 LPETAAPISHAQTAPSSIVSTHPMQTRAKSGIHKPKTFLAATKHPISP----NIASIPLP 588
+PE + SH +T + + + + A IH FL+ K +SP + I
Sbjct: 26 VPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEK--VSPLYHSFLVCIAKA 83
Query: 589 NTPTCFTQANKDPNWRAAMLTEFKALEDLQTWSLVPPHPSQNLVGCKWVFKLKQKSDGSI 648
P+ + +A + W AM E A+E TW + P++ +GCKWV+K+K SDG+I
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 649 ERYKARLVAKGFHQREGLDYSETFSPVAKPAIIRVLLTLAVQNDWLIKQLDVSNAFLHGK 708
ERYKARLVAKG+ Q+EG+D+ ETFSPV K ++++L ++ ++ + QLD+SNAFL+G
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 709 LKEEVYMMQPPGFQ----DKSKPNFVCKLHKSLYGLKQAPRAWYEELVDALLAFGFRKSL 764
L EE+YM PPG+ D PN VC L KS+YGLKQA R W+ + L+ FGF +S
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 765 SDTSLFVYSEGSVLLYVLVYVDDILVTGNSQSACASLISELSSQFAMKDLGSLHYFLGME 824
SD + F+ ++ L VLVYVDDI++ N+ +A L S+L S F ++DLG L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 825 TVRDSTGPFLSQTKYALDLLTKAQMIDAKPCATPLPHGIKLTPHDGDLLEDPTYYRSLVG 884
R + G + Q KYALDLL + ++ KP + P+ + + H G D YR L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 885 ALQYLTWTRPDLSYSVNLVCQFMSKPTHTHLQVVKRILRYLKGTITHGIKFSKSSSLQIQ 944
L YL TR D+S++VN + QF P H Q V +IL Y+KGT+ G+ +S + +Q+Q
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 945 GFADANWAGSSSDSRSTSGFVIYLGNNPISWSAKKQPTISRSSTEAEYRSLAHSAAETLW 1004
F+DA++ RST+G+ ++LG + ISW +KKQ +S+SS EAEYR+L+ + E +W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1005 LCSLLQDLHVFLPSPPSLWCDNVSALALASNPVFHSK 1041
L ++L + L P L+CDN +A+ +A+N VFH +
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 419 bits (1077), Expect = e-129, Method: Compositional matrix adjust.
Identities = 210/517 (40%), Positives = 312/517 (60%), Gaps = 10/517 (1%)
Query: 533 LPETAAPISHAQTAPSSIVSTHPMQTRAKSGIHKPKTFLAATKHPISP----NIASIPLP 588
+PE + SH +T + + + + A IH FL+ K +SP + I
Sbjct: 26 VPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEK--VSPLYHSFLVCIAKA 83
Query: 589 NTPTCFTQANKDPNWRAAMLTEFKALEDLQTWSLVPPHPSQNLVGCKWVFKLKQKSDGSI 648
P+ + +A + W AM E A+E TW + P++ +GCKWV+K+K SDG+I
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 649 ERYKARLVAKGFHQREGLDYSETFSPVAKPAIIRVLLTLAVQNDWLIKQLDVSNAFLHGK 708
ERYKARLVAKG+ Q+EG+D+ ETFSPV K ++++L ++ ++ + QLD+SNAFL+G
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 709 LKEEVYMMQPPGFQ----DKSKPNFVCKLHKSLYGLKQAPRAWYEELVDALLAFGFRKSL 764
L EE+YM PPG+ D PN VC L KS+YGLKQA R W+ + L+ FGF +S
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 765 SDTSLFVYSEGSVLLYVLVYVDDILVTGNSQSACASLISELSSQFAMKDLGSLHYFLGME 824
SD + F+ ++ L VLVYVDDI++ N+ +A L S+L S F ++DLG L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 825 TVRDSTGPFLSQTKYALDLLTKAQMIDAKPCATPLPHGIKLTPHDGDLLEDPTYYRSLVG 884
R + G + Q KYALDLL + ++ KP + P+ + + H G D YR L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 885 ALQYLTWTRPDLSYSVNLVCQFMSKPTHTHLQVVKRILRYLKGTITHGIKFSKSSSLQIQ 944
L YL TR D+S++VN + QF P H Q V +IL Y+KGT+ G+ +S + +Q+Q
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 945 GFADANWAGSSSDSRSTSGFVIYLGNNPISWSAKKQPTISRSSTEAEYRSLAHSAAETLW 1004
F+DA++ RST+G+ ++LG + ISW +KKQ +S+SS EAEYR+L+ + E +W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1005 LCSLLQDLHVFLPSPPSLWCDNVSALALASNPVFHSK 1041
L ++L + L P L+CDN +A+ +A+N VFH +
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 256 bits (655), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 165/226 (73%), Gaps = 1/226 (0%)
Query: 779 LYVLVYVDDILVTGNSQSACASLISELSSQFAMKDLGSLHYFLGMETVRDSTGPFLSQTK 838
+Y+L+YVDDIL+TG+S + LI +LSS F+MKDLG +HYFLG++ +G FLSQTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 839 YALDLLTKAQMIDAKPCATPLPHGIKLTPHDGDLLEDPTYYRSLVGALQYLTWTRPDLSY 898
YA +L A M+D KP +TPLP + + DP+ +RS+VGALQYLT TRPD+SY
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISY 119
Query: 899 SVNLVCQFMSKPTHTHLQVVKRILRYLKGTITHGIKFSKSSSLQIQGFADANWAGSSSDS 958
+VN+VCQ M +PT ++KR+LRY+KGTI HG+ K+S L +Q F D++WAG +S
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 959 RSTSGFVIYLGNNPISWSAKKQPTISRSSTEAEYRSLAHSAAETLW 1004
RST+GF +LG N ISWSAK+QPT+SRSSTE EYR+LA +AAE W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 122 bits (306), Expect = 1e-31, Method: Composition-based stats.
Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 12/137 (8%)
Query: 556 MQTRAKSGIHK--PKTFLAATKHPISPNIASIPLPNTPTCFTQANKDPNWRAAMLTEFKA 613
M TR+K+GI+K PK L T + P A KDP W AM E A
Sbjct: 1 MLTRSKAGINKLNPKYSLTITT----------TIKKEPKSVIFALKDPGWCQAMQEELDA 50
Query: 614 LEDLQTWSLVPPHPSQNLVGCKWVFKLKQKSDGSIERYKARLVAKGFHQREGLDYSETFS 673
L +TW LVPP +QN++GCKWVFK K SDG+++R KARLVAKGFHQ EG+ + ET+S
Sbjct: 51 LSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYS 110
Query: 674 PVAKPAIIRVLLTLAVQ 690
PV + A IR +L +A Q
Sbjct: 111 PVVRTATIRTILNVAQQ 127
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 77.4 bits (189), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 888 YLTWTRPDLSYSVNLVCQFMSKPTHTHLQVVKRILRYLKGTITHGIKFSKSSSLQIQGFA 947
YLT TRPDL+++VN + QF S +Q V ++L Y+KGT+ G+ +S +S LQ++ FA
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 948 DANWAGSSSDSRSTSGF 964
D++WA RS +GF
Sbjct: 62 DSDWASCPDTRRSVTGF 78