BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2680.1
(262 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49770.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 44 6e-05
>AT1G49770.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr1:18424578-18426531 FORWARD LENGTH=308 |
201606
Length = 308
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 42 ERHKLAERERRKSMRELFLSLHSLLPHANTVRKEQSAILDEIIKYIPIAAARLRSLQNRK 101
E H ERERRK MR++F LH+LLP + ++S I+DE + I L+ L+ +K
Sbjct: 72 EIHIWTERERRKKMRDMFSKLHALLPQLPP-KADKSTIVDEAVSSIKSLEQTLQKLEMQK 130