BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2700.1
(482 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70970.1 | F-box and associated interaction domains-containin... 74 6e-14
AT1G32420.1 | F-box and associated interaction domains-containin... 72 1e-13
AT5G65850.1 | F-box and associated interaction domains-containin... 70 1e-12
AT2G16450.1 | F-box and associated interaction domains-containin... 67 2e-11
AT2G15640.1 | F-box family protein | Chr2:6816792-6818072 REVERS... 65 5e-11
>AT1G70970.1 | F-box and associated interaction domains-containing
protein | Chr1:26759834-26761042 FORWARD LENGTH=402 |
201606
Length = 402
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 43/285 (15%)
Query: 50 LEFEILNRLPMKSLARFKIVCKRWSYLIQKDQQFIDLHLARFKTRLPSRLFIV--VPQPP 107
L+ EI++ LP+KSL RF IV K+W+ +I + +QF L+L R TR P +F+V + P
Sbjct: 14 LQTEIMSWLPLKSLLRFVIVSKKWASII-RGEQFKALYLRRSMTR-PRLMFMVRRIATLP 71
Query: 108 PPKKLIEDPDYFEFWPYKEFHITADI--------LFEEENTKLKLVVDTIREVDSSSYNV 159
P +++ +F+ + +E I + +++E+ +R +++Y
Sbjct: 72 PEPEMV----WFQSFCKEERCIPGQLEVEFLFHSVYQEKIPYFSSGQQQLRVPPNTNYTS 127
Query: 160 ISKPVNGLISLIESYDEHVARICSIST--GQVSPWFQASSIAVGEEHVGLPNRYAFGFDP 217
+S+P+ GLI L E +C+ T + P QA A + G+D
Sbjct: 128 VSQPIGGLICL---QSETKFALCNPGTKKSRALPDIQAHEKAFITSFL--------GYDE 176
Query: 218 ATNEHKLICVLTIRSEDRDFKYFLGGVLTIGRQCNNNIWRRI----KEFVPYSLNDDYVY 273
ATN K++C+ + + + + + VLT+ + WR I K+ P + +
Sbjct: 177 ATNVFKVLCLTMVWAHEPSKRVYEYQVLTVESGVESCSWRGITCKEKDHTPETQG---LC 233
Query: 274 VNGVIYWSNSSLDDWAYISILRPVYLVAFDVGSEKFRTITIPDYI 318
GV+Y+ S D RP+ +++F+V S++F I +PD +
Sbjct: 234 KGGVLYYGARSTSD------HRPL-VMSFNVRSQEFTAIELPDQL 271
>AT1G32420.1 | F-box and associated interaction domains-containing
protein | Chr1:11701995-11702903 FORWARD LENGTH=302 |
201606
Length = 302
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 130/323 (40%), Gaps = 70/323 (21%)
Query: 50 LEFEILNRLPMKSLARFKIVCKRWSYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPP 109
L EIL +LP KSL RF+ V K+W +I + FID + R T+ PPP
Sbjct: 41 LTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQ------------PPP 88
Query: 110 KKLIEDPDYFEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVISKPVNGLIS 169
+ + + +P F I + + + K L +SSY+ V GLI
Sbjct: 89 RDIKLIFHHQVLYPGPHFFIFSST-YPQNTDKESLTTR------ASSYHY----VRGLIC 137
Query: 170 LIESYDEHVARICSISTGQVSPWFQASSIAVGEEHVGLP--NRYA------FGFDPATNE 221
C + +P ++ +P NRY FG+DP N+
Sbjct: 138 CWSH--------CPTTVDIYNP--------TTRQYYTVPDTNRYQYIETCFFGYDPVENQ 181
Query: 222 HKLICVLTIRSEDRDFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLNDDYVYVNGVIYWS 281
+K++ + E+ + F T+G WR I+ + L D V +NGVIY+
Sbjct: 182 YKVMVLPKYYMEESPCQVF-----TVGDPIEKP-WRDIQGIGVHFLLKDAVCINGVIYYQ 235
Query: 282 NSSLDDWAYISILRPVYLVAFDVGSEKFRTITIPDYILDHPRLFGRFKEIAQLFEVDGNL 341
++ Y +LV+FDV SEKF + P + DHP L G L
Sbjct: 236 ATNEYGSTY-------FLVSFDVRSEKFNHVKAPKILTDHP---------CTLINYQGKL 279
Query: 342 AMVVKLNDFTFNMYIYEDADYKD 364
+++ +++ EDA+ K
Sbjct: 280 GLIMCCKK-GLEIWVMEDAEKKQ 301
>AT5G65850.1 | F-box and associated interaction domains-containing
protein | Chr5:26346317-26347495 FORWARD LENGTH=392 |
201606
Length = 392
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 141/321 (43%), Gaps = 67/321 (20%)
Query: 53 EILNRLPMKSLARFKIVCKRWSYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPPKKL 112
EIL RLP KS+A + V K W +I + Q F +L L R R P LF KK
Sbjct: 42 EILLRLPAKSIATCRCVSKLWISVICR-QDFTELFLTRSLHR-PQLLFCC-------KK- 91
Query: 113 IEDPDYFEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVISKPVNGLISLI- 171
D + F F + + EN+ I + S IS+PVNGLI
Sbjct: 92 --DGNLF-------FFSSPQLQNPYENS------SAISLKNFSLCYKISRPVNGLICFKR 136
Query: 172 ESYDEHVARICSISTGQVSPWFQASSIAVGEEHVGLPNRYAFGFDPATNEHKLICVLTIR 231
+ +E V IC+ STG + ++G P+R+ F ++P + K++ L+ +
Sbjct: 137 KEMNETVTVICNPSTGHTLSLPKPMKTSIG------PSRF-FVYEPIQKQFKVL--LSYK 187
Query: 232 SEDRDFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLNDDYVYVNGVIYWSNSSLDDWAYI 291
S++ VLT+G WR I+ +P+ L + +NGV+Y+ +L YI
Sbjct: 188 SDEHQ-------VLTLGT--GELSWRIIECSMPHILGMSEICINGVLYYPAINLSSGDYI 238
Query: 292 SILRPVYLVAFDVGSEKFRTITIPDYILDHPRLFGRFKEIAQLFEVDGNLAMVVKLNDFT 351
+V FDV SEKFR IT+ + F + L +G LA +V +
Sbjct: 239 -------IVCFDVRSEKFRFITVMEE-------FIKAAHDGTLINYNGKLASLVS-ERYC 283
Query: 352 F--------NMYIYEDADYKD 364
F +++ +DA+ K+
Sbjct: 284 FVDGRSKSIELWVLQDAEKKE 304
>AT2G16450.1 | F-box and associated interaction domains-containing
protein | Chr2:7131520-7132803 REVERSE LENGTH=427 |
201606
Length = 427
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 170/435 (39%), Gaps = 76/435 (17%)
Query: 50 LEFEILNRLPMKSLARFKIVCKRWSYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPP 109
L EIL+RLP KS+ RF V KRW+ + F +L L R T+ P LF + +
Sbjct: 10 LILEILSRLPAKSVRRFHCVSKRWASIFG-SPYFKELFLTRSSTK-PRLLFAIAEKGNKE 67
Query: 110 K----KLIEDPDYFEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVISKPVN 165
K + P + + A F + L++ ++ S
Sbjct: 68 KDCVWRFFSSPQLENPYEKSSSTLVATAEFHVRFSPDNLLICHYYDLKYFSIGY----AF 123
Query: 166 GLISLIESYDEHVARICSISTGQVSPWFQASSIAVGEEHVGLPNRYA-------FGFDPA 218
GLI + + IC+ +TG+ + LPNRY FGFDP
Sbjct: 124 GLIYIYGNRGRARPLICNPTTGR---------------YAILPNRYTYRKAFSFFGFDPI 168
Query: 219 TNEHKLICVLTIRSEDRDFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLNDDYVYVNGVI 278
++K + ++ V+T G + WRRIK + + + + V +NGV+
Sbjct: 169 DKQYKALSMVYPSGPGH------SRVITFG--AGDLKWRRIKCSLRHDIKSEGVCINGVL 220
Query: 279 YWSNSSLDDWAYIS---ILRPVYLVAFDVGSEKFRTITIPDYILDHPRLFGRFKEIAQLF 335
Y+ + DW+ ++ + +V FDV SEKF I + K +L
Sbjct: 221 YYLGDT-SDWSRVNGNHVTSGYMIVCFDVRSEKFTFIDV--------------KRFCRLI 265
Query: 336 EVDGNLAMVVKLNDFTFN-MYIYEDADYKDKDE-KINGTSTS-------ASPKNGRWSEA 386
G LA++ +D +Y + D ++ E +N +T+ A + WS+
Sbjct: 266 NYKGKLAVIYWEDDVDIQELYYKKGIDVEEYVENNVNADATNELCVWILADVEKQEWSKH 325
Query: 387 IRITLPFYIWYSRTVKFHTFIGSDDKILVTSSIWDLERRGWGKKEPLSISCYNWKKDTWT 446
Y W KF + S + + I R K+P + +N ++++
Sbjct: 326 A------YTWTDE--KFFRRLVSIAGVTASGEIV-FSMRKCNPKQPFYVFYFNPERNSLQ 376
Query: 447 KVDVSGVPSSVPQLC 461
+V++ G +V + C
Sbjct: 377 RVEIQGFGEAVTKSC 391
>AT2G15640.1 | F-box family protein | Chr2:6816792-6818072 REVERSE
LENGTH=426 | 201606
Length = 426
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 172/457 (37%), Gaps = 86/457 (18%)
Query: 50 LEFEILNRLPMKSLARFKIVCKRWSYLIQKDQQFIDLHLARFKTRLPSRLFIVVPQPPPP 109
L EIL+RLP KS+ARF V K+W + F +L L R T+ P LF + +
Sbjct: 10 LTVEILSRLPAKSVARFHCVSKQWGSIFGS-PYFKELFLTRSSTK-PRLLFAMAEKVNEE 67
Query: 110 K----KLIEDPDYFEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVISKPVN 165
K + P + + A F + + KL + ++ S S
Sbjct: 68 KNCVWRFFSTPQLENPYEKSSSTLVAAAEFHVKFSPDKLYICHCYDLKYFSIGYAS---- 123
Query: 166 GLISLIESYDEHVARICSISTGQVSPWFQASSIAVGEEHVGLPNRYA-------FGFDPA 218
GLI L E IC+ +TG+ + LPNRY FGFDP
Sbjct: 124 GLIYLYGDRGEATPLICNPTTGR---------------YAILPNRYTYRKAYSFFGFDPI 168
Query: 219 TNEHKLICVLTIRSEDRDFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLND---DYVYVN 275
++K + + +LT G + WR+I + Y +D + + +N
Sbjct: 169 DKQYKALSIFYPSGPGH------SKILTFG--AGHMKWRKINCPLRYDRHDIKSEGICIN 220
Query: 276 GVIYWSNSSLDDWA-YISILRPVYLVAFDVGSEKFRTITIPDYILDHPRLFGRFKEIAQL 334
GV+Y+ S+ D I+ +V FD+ SEKF I + + +L
Sbjct: 221 GVLYYLGSTSDCVKDGHGIVSDYVIVCFDIRSEKFTFIDV--------------ERFCRL 266
Query: 335 FEVDGNLAMVVKLNDFTFNMYIYEDAD----YKDKDEKINGTS--TSASPKNGRWSEAIR 388
G LA++ +D Y D D Y D+ IN K +WS+
Sbjct: 267 INYKGKLAVIYWEDDVDIYKLYYSDVDEYVEYNINDDDINELRVWVLEDVKKQQWSKYA- 325
Query: 389 ITLPFYIW-----YSRTVKFHTFIGSDDKILVTSSIWDLERRGWGKKEPLSISCYNWKKD 443
Y W + R V G+ +V S + + K+P + +N +++
Sbjct: 326 -----YTWTDDRFFRRRVSIAG--GTASGEIVFSML------KYTPKQPFYVFYFNPERN 372
Query: 444 TWTKVDVSGVPSSVPQLCPSSFSTTLSESLLSLNNHN 480
T +V++ G + + C T + LN H+
Sbjct: 373 TLQRVEIQGFGEVLKKTCR---VCTFVNHVEDLNVHD 406