BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2710.1
(114 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G12850.1 | CCCH-type zinc finger protein with ARM repeat doma... 137 1e-38
AT2G41900.1 | CCCH-type zinc finger protein with ARM repeat doma... 130 4e-36
AT5G58620.1 | zinc finger (CCCH-type) family protein | Chr5:2369... 128 1e-35
AT2G40140.2 | zinc finger (CCCH-type) family protein | Chr2:1677... 110 2e-29
AT2G40140.1 | zinc finger (CCCH-type) family protein | Chr2:1677... 110 2e-29
>AT5G12850.1 | CCCH-type zinc finger protein with ARM repeat
domain-containing protein | Chr5:4057068-4059188 FORWARD
LENGTH=706 | 201606
Length = 706
Score = 137 bits (344), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 66/75 (88%)
Query: 10 KPNDHSLSVTSEKKEYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPFVH 69
KP+ ++ SEKKEYPIDPSLPDIK+GIYSTDEFRMFS K+ PCSR YSHDWT+CPF H
Sbjct: 224 KPHGTDVTFASEKKEYPIDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAH 283
Query: 70 PGENARRRDPRKFHY 84
PGENARRRDPRKFHY
Sbjct: 284 PGENARRRDPRKFHY 298
>AT2G41900.1 | CCCH-type zinc finger protein with ARM repeat
domain-containing protein | Chr2:17491352-17493502
FORWARD LENGTH=716 | 201606
Length = 716
Score = 130 bits (326), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 57/69 (82%), Positives = 61/69 (88%)
Query: 16 LSVTSEKKEYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPFVHPGENAR 75
L T KKEYP+DPSLPDIKN IY+TDEFRM+S KV PCSR YSHDWT+CPFVHPGENAR
Sbjct: 234 LKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENAR 293
Query: 76 RRDPRKFHY 84
RRDPRKFHY
Sbjct: 294 RRDPRKFHY 302
>AT5G58620.1 | zinc finger (CCCH-type) family protein |
Chr5:23693959-23695782 FORWARD LENGTH=607 | 201606
Length = 607
Score = 128 bits (321), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 52/65 (80%), Positives = 61/65 (93%)
Query: 20 SEKKEYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPFVHPGENARRRDP 79
SE+KEYP+DP+LPDIKNG+Y TDEFRM++ K+ PCSR YSHDWT+CPFVHPGENARRRDP
Sbjct: 186 SERKEYPVDPTLPDIKNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDP 245
Query: 80 RKFHY 84
RK+HY
Sbjct: 246 RKYHY 250
>AT2G40140.2 | zinc finger (CCCH-type) family protein |
Chr2:16772537-16774330 FORWARD LENGTH=597 | 201606
Length = 597
Score = 110 bits (276), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 52/61 (85%)
Query: 24 EYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPFVHPGENARRRDPRKFH 83
+YP D SLPDI G+Y TD+FRMFS KV PCSR YSHDWT+CPFVHPGENARRRDPRK+
Sbjct: 195 KYPADASLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYP 254
Query: 84 Y 84
Y
Sbjct: 255 Y 255
>AT2G40140.1 | zinc finger (CCCH-type) family protein |
Chr2:16772537-16774330 FORWARD LENGTH=597 | 201606
Length = 597
Score = 110 bits (276), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 52/61 (85%)
Query: 24 EYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPFVHPGENARRRDPRKFH 83
+YP D SLPDI G+Y TD+FRMFS KV PCSR YSHDWT+CPFVHPGENARRRDPRK+
Sbjct: 195 KYPADASLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYP 254
Query: 84 Y 84
Y
Sbjct: 255 Y 255