BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2780.1
(1037 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57040.2 | response regulator 9 | Chr3:21110059-21111228 FORW... 236 6e-71
AT3G57040.1 | response regulator 9 | Chr3:21110059-21111228 FORW... 236 6e-71
AT2G41310.1 | response regulator 3 | Chr2:17222280-17223536 FORW... 232 1e-69
AT1G59940.1 | response regulator 3 | Chr1:22065894-22066895 REVE... 171 6e-48
AT1G59940.2 | response regulator 3 | Chr1:22065894-22067171 REVE... 172 2e-47
>AT3G57040.2 | response regulator 9 | Chr3:21110059-21111228 FORWARD
LENGTH=234 | 201606
Length = 234
Score = 236 bits (601), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 138/246 (56%), Positives = 168/246 (68%), Gaps = 22/246 (8%)
Query: 1 MVMAAESQFHILAVDDCRLDRMLIEKLLKKTSYQVTTVDSGSKALEFLGLLEDEQRNSSP 60
M MAAESQFH+LAVDD DR LIE+LL+K+S QVTTVDSGSKALEFLGL + +S+
Sbjct: 1 MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSND 58
Query: 61 PSVSSDF---HQELEVNLIITDYCMPGMSGYDLLKKIKESSSLKDIPVVIMSSENVPSRI 117
P+ S HQ +EVNLIITDYCMPGM+GYDLLKK+KESS+ +DIPVVIMSSENVP+RI
Sbjct: 59 PNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 118
Query: 118 TRCLEEGAEEFFLKPVKLSDVKKLKPHSRRGKSRDQQEHQPEQEPELKVEVHKPQEEEEE 177
+RCLEEGAEEFFLKPV+L+D+ KLKPH + K ++Q+ E E KVE P +
Sbjct: 119 SRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLE--EIETTSKVENGVPTAVAD- 175
Query: 178 KSKPKEQPEEEKSELEEQSEEEKKSKLEEQPEEEEELIVELEPNEINNKRKGMEEGISQE 237
PE + S E + L +EE+ L INNKRK +EEGIS +
Sbjct: 176 -------PEIKDSTNIEIEILPLQQDLLLVQQEEQTL-------SINNKRKSVEEGISTD 221
Query: 238 RTRPRW 243
R RPR+
Sbjct: 222 RARPRF 227
>AT3G57040.1 | response regulator 9 | Chr3:21110059-21111228 FORWARD
LENGTH=234 | 201606
Length = 234
Score = 236 bits (601), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 138/246 (56%), Positives = 168/246 (68%), Gaps = 22/246 (8%)
Query: 1 MVMAAESQFHILAVDDCRLDRMLIEKLLKKTSYQVTTVDSGSKALEFLGLLEDEQRNSSP 60
M MAAESQFH+LAVDD DR LIE+LL+K+S QVTTVDSGSKALEFLGL + +S+
Sbjct: 1 MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSND 58
Query: 61 PSVSSDF---HQELEVNLIITDYCMPGMSGYDLLKKIKESSSLKDIPVVIMSSENVPSRI 117
P+ S HQ +EVNLIITDYCMPGM+GYDLLKK+KESS+ +DIPVVIMSSENVP+RI
Sbjct: 59 PNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 118
Query: 118 TRCLEEGAEEFFLKPVKLSDVKKLKPHSRRGKSRDQQEHQPEQEPELKVEVHKPQEEEEE 177
+RCLEEGAEEFFLKPV+L+D+ KLKPH + K ++Q+ E E KVE P +
Sbjct: 119 SRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLE--EIETTSKVENGVPTAVAD- 175
Query: 178 KSKPKEQPEEEKSELEEQSEEEKKSKLEEQPEEEEELIVELEPNEINNKRKGMEEGISQE 237
PE + S E + L +EE+ L INNKRK +EEGIS +
Sbjct: 176 -------PEIKDSTNIEIEILPLQQDLLLVQQEEQTL-------SINNKRKSVEEGISTD 221
Query: 238 RTRPRW 243
R RPR+
Sbjct: 222 RARPRF 227
>AT2G41310.1 | response regulator 3 | Chr2:17222280-17223536 FORWARD
LENGTH=225 | 201606
Length = 225
Score = 232 bits (591), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/246 (55%), Positives = 169/246 (68%), Gaps = 27/246 (10%)
Query: 1 MVMAAESQFHILAVDDCRLDRMLIEKLLKKTSYQVTTVDSGSKALEFLGLLEDEQRNSSP 60
MVM ES+FH+LAVDD DR +IE+LL+K+S QVTTVDSGSKALEFLGL D+ + +
Sbjct: 1 MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDN-DPNA 59
Query: 61 PSVSSDFHQELEVNLIITDYCMPGMSGYDLLKKIKESSSLKDIPVVIMSSENVPSRITRC 120
S S HQE+E+NLIITDYCMPGM+GYDLLKK+KES++ + IPVVIMSSENVP+RI+RC
Sbjct: 60 LSTSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRC 119
Query: 121 LEEGAEEFFLKPVKLSDVKKLKPHSRRGKSRDQQEHQPEQEPELKVEVHKPQEEEE-EKS 179
LEEGAEEFFLKPVKL+D+ KLKPH + K LK E KP EE S
Sbjct: 120 LEEGAEEFFLKPVKLADLTKLKPHMMKTK--------------LKKESEKPVAIEEIVVS 165
Query: 180 KPKEQPEEEKSELEEQSEEEKKSKLEEQPEEEEELIVELEPNEINNKRKGMEEGISQERT 239
KP+ E EE+S + L ++ E E+ LEP +NKRK MEE +S +R+
Sbjct: 166 KPE------IEEEEEESSVIEILPLHQEIESEQ-----LEPMLSSNKRKAMEEVVSTDRS 214
Query: 240 RPRWQD 245
RP++ D
Sbjct: 215 RPKYND 220
>AT1G59940.1 | response regulator 3 | Chr1:22065894-22066895 REVERSE
LENGTH=231 | 201606
Length = 231
Score = 171 bits (433), Expect = 6e-48, Method: Composition-based stats.
Identities = 88/140 (62%), Positives = 112/140 (80%), Gaps = 9/140 (6%)
Query: 8 QFHILAVDDCRLDRMLIEKLLKKTSYQVTTVDSGSKALEFLGLLEDEQRNSSPPSVSSDF 67
Q H+LAVDD +DR++IE+LL+ TS +VT VDSG +ALEFLGL +D+ +V D
Sbjct: 32 QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKA------AVEFD- 84
Query: 68 HQELEVNLIITDYCMPGMSGYDLLKKIKESSSLKDIPVVIMSSENVPSRITRCLEEGAEE 127
L+V+LIITDYCMPGM+GY+LLKKIKES+S K++PVVIMSSENV +RI RCLEEGAE+
Sbjct: 85 --RLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAED 142
Query: 128 FFLKPVKLSDVKKLKPHSRR 147
F LKPVKL+DVK+L+ + R
Sbjct: 143 FLLKPVKLADVKRLRSYLTR 162
>AT1G59940.2 | response regulator 3 | Chr1:22065894-22067171 REVERSE
LENGTH=323 | 201606
Length = 323
Score = 172 bits (437), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 113/140 (80%), Gaps = 9/140 (6%)
Query: 8 QFHILAVDDCRLDRMLIEKLLKKTSYQVTTVDSGSKALEFLGLLEDEQRNSSPPSVSSDF 67
Q H+LAVDD +DR++IE+LL+ TS +VT VDSG +ALEFLGL +D+ + +F
Sbjct: 124 QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDK--------AAVEF 175
Query: 68 HQELEVNLIITDYCMPGMSGYDLLKKIKESSSLKDIPVVIMSSENVPSRITRCLEEGAEE 127
+ L+V+LIITDYCMPGM+GY+LLKKIKES+S K++PVVIMSSENV +RI RCLEEGAE+
Sbjct: 176 DR-LKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAED 234
Query: 128 FFLKPVKLSDVKKLKPHSRR 147
F LKPVKL+DVK+L+ + R
Sbjct: 235 FLLKPVKLADVKRLRSYLTR 254