BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2790.1
(495 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G03250.1 | Homeodomain-like superfamily protein | Chr4:142505... 198 3e-57
AT1G28420.1 | homeobox-1 | Chr1:9979936-9987460 FORWARD LENGTH=1... 67 3e-11
AT5G44180.2 | Homeodomain-like transcriptional regulator | Chr5:... 64 3e-10
AT5G44180.3 | Homeodomain-like transcriptional regulator | Chr5:... 63 4e-10
AT5G44180.1 | Homeodomain-like transcriptional regulator | Chr5:... 63 4e-10
>AT4G03250.1 | Homeodomain-like superfamily protein |
Chr4:1425050-1427744 FORWARD LENGTH=507 | 201606
Length = 507
Score = 198 bits (504), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 150/247 (60%), Gaps = 22/247 (8%)
Query: 11 EKNIKRKLKSPAQIEALENFYNEHTYPTEELKAQFAEDNGLSLKQVSGWFCHRRLKDKR- 69
E + KRKLK+P Q+ ALENFYNEH YPTEE+K + AE+ GL+ KQVSGWFCHRRLKDKR
Sbjct: 18 ENSKKRKLKTPMQVMALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWFCHRRLKDKRH 77
Query: 70 -KQKACANGRQDLSSGVIQDHGSGLKQDSCSSNKQGNYRNFDYREVESRRFDGTDYIAPD 128
K+ A G QD SS V+QD GSGL+QDSC S KQ +Y N REVES+R + D
Sbjct: 78 VKEDGNAIGSQDRSSVVLQDRGSGLRQDSCGSTKQTDYWNPKPREVESQRLYMGNADGED 137
Query: 129 PTCRNRSEGLRTRHFGPVGDTSSGTSSTSHEKLLPQSETPYDTESSRYPVRSNEYMLMSR 188
T +RS LR + L+ + D ESSRY V + + +
Sbjct: 138 STSSDRSSSLR-------------------KNLVSSKDGIRDVESSRY-VAHKDVIQHPQ 177
Query: 189 SVENKGKMVASGYLRLQDEVANAAIIAVKRQLGRYFCEDGPSLGIEFQPLPPGAFDLQEP 248
+ + G SGYL+++ E N AI AVKRQLGR + EDGP LG+EF PLPPGAF+ Q
Sbjct: 178 FMRSYGYNKPSGYLKVKGESENFAITAVKRQLGRQYQEDGPPLGVEFDPLPPGAFEPQTN 237
Query: 249 YQFLDPI 255
+PI
Sbjct: 238 PIVHEPI 244
>AT1G28420.1 | homeobox-1 | Chr1:9979936-9987460 FORWARD
LENGTH=1705 | 201606
Length = 1705
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 15 KRKLKSPAQIEALENFYNEHTYPTEELKAQFAEDNGLSLKQVSGWFCHRRLKDKR 69
KR++K+P Q+E LE Y+E YP+E +A+ +E LS +Q+ WFCHRRLKDK+
Sbjct: 42 KRQMKTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKK 96
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 212 AIIAVKRQLGRYFCEDGPSLGIEFQPLPPGAFDLQEPYQFLDPIQQTSHGISKSRKERHI 271
AI+ ++ QLG +DGP LG+EF PLPPGAF Q + H ERH
Sbjct: 184 AIVCIEAQLGEPLRDDGPILGMEFDPLPPGAFGTPIAMQ-----KHLLHPYESDLYERHD 238
Query: 272 DMPRR 276
PRR
Sbjct: 239 PRPRR 243
>AT5G44180.2 | Homeodomain-like transcriptional regulator |
Chr5:17783172-17789872 FORWARD LENGTH=1507 | 201606
Length = 1507
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 11 EKNIKRKLKSPAQIEALENFYNEHTYPTEELKAQFAEDNGLSLKQVSGWFCHRRLKDKRK 70
E KRK+K+ AQ+E LEN Y+ YP+E ++A + LS +Q+ WFCHRRLK+++
Sbjct: 16 ESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERKS 75
Query: 71 QKACANGRQDLSS 83
R++L +
Sbjct: 76 TTPSKRQRKELVT 88
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Query: 212 AIIAVKRQLGRYFCEDGPSLGIEFQPLPPGAFDLQEPYQFLDPIQQTSH 260
AI V+ QLG ++GP LG+EF PLPPGAF + PI+ SH
Sbjct: 140 AIGYVEAQLGERLRDNGPVLGMEFDPLPPGAFGM--------PIEMPSH 180
>AT5G44180.3 | Homeodomain-like transcriptional regulator |
Chr5:17783172-17789872 FORWARD LENGTH=1694 | 201606
Length = 1694
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 11 EKNIKRKLKSPAQIEALENFYNEHTYPTEELKAQFAEDNGLSLKQVSGWFCHRRLKDKRK 70
E KRK+K+ AQ+E LEN Y+ YP+E ++A + LS +Q+ WFCHRRLK+++
Sbjct: 16 ESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERKS 75
Query: 71 QKACANGRQDLSS 83
R++L +
Sbjct: 76 TTPSKRQRKELVT 88
>AT5G44180.1 | Homeodomain-like transcriptional regulator |
Chr5:17783172-17789872 FORWARD LENGTH=1694 | 201606
Length = 1694
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 11 EKNIKRKLKSPAQIEALENFYNEHTYPTEELKAQFAEDNGLSLKQVSGWFCHRRLKDKRK 70
E KRK+K+ AQ+E LEN Y+ YP+E ++A + LS +Q+ WFCHRRLK+++
Sbjct: 16 ESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERKS 75
Query: 71 QKACANGRQDLSS 83
R++L +
Sbjct: 76 TTPSKRQRKELVT 88