BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2810.1
(317 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10250.5 | histidine-tRNA ligase | Chr3:3168371-3170418 REVER... 350 e-121
AT3G10250.4 | histidine-tRNA ligase | Chr3:3168371-3170418 REVER... 350 e-121
AT3G10250.2 | histidine-tRNA ligase | Chr3:3168371-3170418 REVER... 350 e-121
AT3G10250.1 | histidine-tRNA ligase | Chr3:3168371-3170418 REVER... 350 e-121
AT3G10250.3 | histidine-tRNA ligase | Chr3:3168781-3170418 REVER... 298 e-100
>AT3G10250.5 | histidine-tRNA ligase | Chr3:3168371-3170418 REVERSE
LENGTH=324 | 201606
Length = 324
Score = 350 bits (899), Expect = e-121, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 238/325 (73%), Gaps = 9/325 (2%)
Query: 1 MSSGEVRRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLVEAKIEPGFTELVWQKLEEEN 60
MSSG VRRVSRQDIQLVQNLIERCLQLYMNQKEVV+TLL +AKIEPGFTELVWQKLEEEN
Sbjct: 1 MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60
Query: 61 REFFNAYNVRLVVKHQIMVFNELLGKQVELMRKTSPVGLGSLPMSNGSNSSSLHQRP-SY 119
REFF AY +RL+VKHQIM FN+LL +QV MR+ P G+ S+ +NGS+ S++Q+ Y
Sbjct: 61 REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSMNQKQLCY 120
Query: 120 VSQQRMQPSSLENMHLTVGPSSRPS--NGRPAVHRSLQTANDTSTQTRKMDVSPNMLPAQ 177
S+ Q E+ H + S + NG ++ ++ ++ + ST R++D SPNML +Q
Sbjct: 121 PSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLSSQ 180
Query: 178 NSHMSMMQGLNGTVIKTESGYSNSSPFAYGLEGNFLETRPTIGDAAVASFRSVEPNAQTL 237
++M MMQG+NG +IK+E+ ++N + F YG E N LE +GD ++ +F S E N Q L
Sbjct: 181 TTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQPL 239
Query: 238 DTSLLETDASSFGFLGQISRNFSLSDLTADFSQSSDILETYSRSPF----TDDFLDSPGR 293
LLE +AS+FGFLGQI RNFSLSDLTADFSQSS+ILE+Y RSPF ++FLDS R
Sbjct: 240 SDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDSRDR 299
Query: 294 -DCQGDNKRLDTISEGLSFEEFGSD 317
+ QGDNKRLDTISEG S++ GS+
Sbjct: 300 GEYQGDNKRLDTISEGFSYDNIGSE 324
>AT3G10250.4 | histidine-tRNA ligase | Chr3:3168371-3170418 REVERSE
LENGTH=324 | 201606
Length = 324
Score = 350 bits (899), Expect = e-121, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 238/325 (73%), Gaps = 9/325 (2%)
Query: 1 MSSGEVRRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLVEAKIEPGFTELVWQKLEEEN 60
MSSG VRRVSRQDIQLVQNLIERCLQLYMNQKEVV+TLL +AKIEPGFTELVWQKLEEEN
Sbjct: 1 MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60
Query: 61 REFFNAYNVRLVVKHQIMVFNELLGKQVELMRKTSPVGLGSLPMSNGSNSSSLHQRP-SY 119
REFF AY +RL+VKHQIM FN+LL +QV MR+ P G+ S+ +NGS+ S++Q+ Y
Sbjct: 61 REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSMNQKQLCY 120
Query: 120 VSQQRMQPSSLENMHLTVGPSSRPS--NGRPAVHRSLQTANDTSTQTRKMDVSPNMLPAQ 177
S+ Q E+ H + S + NG ++ ++ ++ + ST R++D SPNML +Q
Sbjct: 121 PSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLSSQ 180
Query: 178 NSHMSMMQGLNGTVIKTESGYSNSSPFAYGLEGNFLETRPTIGDAAVASFRSVEPNAQTL 237
++M MMQG+NG +IK+E+ ++N + F YG E N LE +GD ++ +F S E N Q L
Sbjct: 181 TTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQPL 239
Query: 238 DTSLLETDASSFGFLGQISRNFSLSDLTADFSQSSDILETYSRSPF----TDDFLDSPGR 293
LLE +AS+FGFLGQI RNFSLSDLTADFSQSS+ILE+Y RSPF ++FLDS R
Sbjct: 240 SDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDSRDR 299
Query: 294 -DCQGDNKRLDTISEGLSFEEFGSD 317
+ QGDNKRLDTISEG S++ GS+
Sbjct: 300 GEYQGDNKRLDTISEGFSYDNIGSE 324
>AT3G10250.2 | histidine-tRNA ligase | Chr3:3168371-3170418 REVERSE
LENGTH=324 | 201606
Length = 324
Score = 350 bits (899), Expect = e-121, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 238/325 (73%), Gaps = 9/325 (2%)
Query: 1 MSSGEVRRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLVEAKIEPGFTELVWQKLEEEN 60
MSSG VRRVSRQDIQLVQNLIERCLQLYMNQKEVV+TLL +AKIEPGFTELVWQKLEEEN
Sbjct: 1 MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60
Query: 61 REFFNAYNVRLVVKHQIMVFNELLGKQVELMRKTSPVGLGSLPMSNGSNSSSLHQRP-SY 119
REFF AY +RL+VKHQIM FN+LL +QV MR+ P G+ S+ +NGS+ S++Q+ Y
Sbjct: 61 REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSMNQKQLCY 120
Query: 120 VSQQRMQPSSLENMHLTVGPSSRPS--NGRPAVHRSLQTANDTSTQTRKMDVSPNMLPAQ 177
S+ Q E+ H + S + NG ++ ++ ++ + ST R++D SPNML +Q
Sbjct: 121 PSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLSSQ 180
Query: 178 NSHMSMMQGLNGTVIKTESGYSNSSPFAYGLEGNFLETRPTIGDAAVASFRSVEPNAQTL 237
++M MMQG+NG +IK+E+ ++N + F YG E N LE +GD ++ +F S E N Q L
Sbjct: 181 TTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQPL 239
Query: 238 DTSLLETDASSFGFLGQISRNFSLSDLTADFSQSSDILETYSRSPF----TDDFLDSPGR 293
LLE +AS+FGFLGQI RNFSLSDLTADFSQSS+ILE+Y RSPF ++FLDS R
Sbjct: 240 SDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDSRDR 299
Query: 294 -DCQGDNKRLDTISEGLSFEEFGSD 317
+ QGDNKRLDTISEG S++ GS+
Sbjct: 300 GEYQGDNKRLDTISEGFSYDNIGSE 324
>AT3G10250.1 | histidine-tRNA ligase | Chr3:3168371-3170418 REVERSE
LENGTH=324 | 201606
Length = 324
Score = 350 bits (899), Expect = e-121, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 238/325 (73%), Gaps = 9/325 (2%)
Query: 1 MSSGEVRRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLVEAKIEPGFTELVWQKLEEEN 60
MSSG VRRVSRQDIQLVQNLIERCLQLYMNQKEVV+TLL +AKIEPGFTELVWQKLEEEN
Sbjct: 1 MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60
Query: 61 REFFNAYNVRLVVKHQIMVFNELLGKQVELMRKTSPVGLGSLPMSNGSNSSSLHQRP-SY 119
REFF AY +RL+VKHQIM FN+LL +QV MR+ P G+ S+ +NGS+ S++Q+ Y
Sbjct: 61 REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSMNQKQLCY 120
Query: 120 VSQQRMQPSSLENMHLTVGPSSRPS--NGRPAVHRSLQTANDTSTQTRKMDVSPNMLPAQ 177
S+ Q E+ H + S + NG ++ ++ ++ + ST R++D SPNML +Q
Sbjct: 121 PSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLSSQ 180
Query: 178 NSHMSMMQGLNGTVIKTESGYSNSSPFAYGLEGNFLETRPTIGDAAVASFRSVEPNAQTL 237
++M MMQG+NG +IK+E+ ++N + F YG E N LE +GD ++ +F S E N Q L
Sbjct: 181 TTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQPL 239
Query: 238 DTSLLETDASSFGFLGQISRNFSLSDLTADFSQSSDILETYSRSPF----TDDFLDSPGR 293
LLE +AS+FGFLGQI RNFSLSDLTADFSQSS+ILE+Y RSPF ++FLDS R
Sbjct: 240 SDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVPNAENFLDSRDR 299
Query: 294 -DCQGDNKRLDTISEGLSFEEFGSD 317
+ QGDNKRLDTISEG S++ GS+
Sbjct: 300 GEYQGDNKRLDTISEGFSYDNIGSE 324
>AT3G10250.3 | histidine-tRNA ligase | Chr3:3168781-3170418 REVERSE
LENGTH=297 | 201606
Length = 297
Score = 298 bits (763), Expect = e-100, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 202/277 (72%), Gaps = 4/277 (1%)
Query: 1 MSSGEVRRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLVEAKIEPGFTELVWQKLEEEN 60
MSSG VRRVSRQDIQLVQNLIERCLQLYMNQKEVV+TLL +AKIEPGFTELVWQKLEEEN
Sbjct: 1 MSSGTVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60
Query: 61 REFFNAYNVRLVVKHQIMVFNELLGKQVELMRKTSPVGLGSLPMSNGSNSSSLHQRP-SY 119
REFF AY +RL+VKHQIM FN+LL +QV MR+ P G+ S+ +NGS+ S++Q+ Y
Sbjct: 61 REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHLQSMNQKQLCY 120
Query: 120 VSQQRMQPSSLENMHLTVGPSSRPS--NGRPAVHRSLQTANDTSTQTRKMDVSPNMLPAQ 177
S+ Q E+ H + S + NG ++ ++ ++ + ST R++D SPNML +Q
Sbjct: 121 PSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNTNVPSSINISTHARRVDASPNMLSSQ 180
Query: 178 NSHMSMMQGLNGTVIKTESGYSNSSPFAYGLEGNFLETRPTIGDAAVASFRSVEPNAQTL 237
++M MMQG+NG +IK+E+ ++N + F YG E N LE +GD ++ +F S E N Q L
Sbjct: 181 TTNMPMMQGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSIPNF-SNESNNQPL 239
Query: 238 DTSLLETDASSFGFLGQISRNFSLSDLTADFSQSSDI 274
LLE +AS+FGFLGQI RNFSLSDLTADFSQSS +
Sbjct: 240 SDPLLEAEASTFGFLGQIPRNFSLSDLTADFSQSSGL 276