BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2930.1
(197 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32550.1 | 2Fe-2S ferredoxin-like superfamily protein | Chr1:... 254 4e-87
AT1G32550.2 | 2Fe-2S ferredoxin-like superfamily protein | Chr1:... 236 1e-79
AT1G10960.1 | ferredoxin 1 | Chr1:3664445-3664891 FORWARD LENGTH... 74 2e-16
AT1G60950.1 | 2Fe-2S ferredoxin-like superfamily protein | Chr1:... 71 1e-15
AT2G27510.1 | ferredoxin 3 | Chr2:11758281-11758748 REVERSE LENG... 71 1e-15
>AT1G32550.1 | 2Fe-2S ferredoxin-like superfamily protein |
Chr1:11771969-11774117 REVERSE LENGTH=181 | 201606
Length = 181
Score = 254 bits (650), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 127/170 (74%), Positives = 141/170 (82%), Gaps = 8/170 (4%)
Query: 31 SFPVTNR---KYHQHSTTRRQQQQVPRAELQTVEGISELSPSSVQQQHKVTVHDRQRGVV 87
+FP+ R + + +TT + ++P E+ T L V HKVTVHDRQRGVV
Sbjct: 17 NFPINRRYITNFRRGATTATCEFRIP-VEVSTPSDRGSL----VVPSHKVTVHDRQRGVV 71
Query: 88 HEFLVPEDQYILHTAEAQNISLPFACRHGCCTSCAVRVKSGELRQPEALGISAELKSQGY 147
HEF VPEDQYILH+AE+QNISLPFACRHGCCTSCAVRVKSGELRQP+ALGISAELKSQGY
Sbjct: 72 HEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSGELRQPQALGISAELKSQGY 131
Query: 148 ALLCVGFPSSDLEVETQDEDEVYWLQFGRYFARGPIDRDDYALELAMGDE 197
ALLCVGFP+SDLEVETQDEDEVYWLQFGRYFARGPI+RDDYALELAMGDE
Sbjct: 132 ALLCVGFPTSDLEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMGDE 181
>AT1G32550.2 | 2Fe-2S ferredoxin-like superfamily protein |
Chr1:11771969-11774117 REVERSE LENGTH=194 | 201606
Length = 194
Score = 236 bits (602), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 139/186 (74%), Gaps = 27/186 (14%)
Query: 31 SFPVTNR---KYHQHSTTRRQQQQVPRAELQTVEGISELSPSSVQQQHKVTVHDRQRGVV 87
+FP+ R + + +TT + ++P E+ T L V HKVTVHDRQRGVV
Sbjct: 17 NFPINRRYITNFRRGATTATCEFRIP-VEVSTPSDRGSL----VVPSHKVTVHDRQRGVV 71
Query: 88 HEFLVPEDQYILHTAEAQNISLPFACRHGCCTSCAVRVKSGELRQPEALGISAELKSQ-- 145
HEF EDQYILH+AE+QNISLPFACRHGCCTSCAVRVKSGELRQP+ALGISAELKSQ
Sbjct: 72 HEF---EDQYILHSAESQNISLPFACRHGCCTSCAVRVKSGELRQPQALGISAELKSQRI 128
Query: 146 --------------GYALLCVGFPSSDLEVETQDEDEVYWLQFGRYFARGPIDRDDYALE 191
GYALLCVGFP+SDLEVETQDEDEVYWLQFGRYFARGPI+RDDYALE
Sbjct: 129 SSLDLIQCQKTYLTGYALLCVGFPTSDLEVETQDEDEVYWLQFGRYFARGPIERDDYALE 188
Query: 192 LAMGDE 197
LAMGDE
Sbjct: 189 LAMGDE 194
>AT1G10960.1 | ferredoxin 1 | Chr1:3664445-3664891 FORWARD
LENGTH=148 | 201606
Length = 148
Score = 73.6 bits (179), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 21/138 (15%)
Query: 46 RRQQ-----QQVPRAELQTVEGISELSPSSVQQQHKVTVHDRQRGVVHEFLVPE------ 94
RRQQ + +P A Q++ G+ SS + +VT + +F+ PE
Sbjct: 17 RRQQTPISLRSLPFANTQSLFGLK----SSTARGGRVTAMATYK---VKFITPEGEQEVE 69
Query: 95 ---DQYILHTAEAQNISLPFACRHGCCTSCAVRVKSGELRQPEALGISAELKSQGYALLC 151
D Y+L AE + LP++CR G C+SCA +V SG + Q + + E S+GY L C
Sbjct: 70 CEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTC 129
Query: 152 VGFPSSDLEVETQDEDEV 169
V +P+SD+ +ET E+ +
Sbjct: 130 VAYPTSDVVIETHKEEAI 147
>AT1G60950.1 | 2Fe-2S ferredoxin-like superfamily protein |
Chr1:22444565-22445011 FORWARD LENGTH=148 | 201606
Length = 148
Score = 71.2 bits (173), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 30 LSFPVTNRKYHQHSTTRRQQQQVPRAELQTVEGISELSPSSVQQQHKVTVHDRQRGVVHE 89
LS + + + S + +P A Q++ G+ S + +VT + +
Sbjct: 6 LSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLK----SGTARGGRVTAMATYK---VK 58
Query: 90 FLVPE---------DQYILHTAEAQNISLPFACRHGCCTSCAVRVKSGELRQPEALGISA 140
F+ PE D Y+L AE I LP++CR G C+SCA +V SG + Q + +
Sbjct: 59 FITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDD 118
Query: 141 ELKSQGYALLCVGFPSSDLEVETQDEDEV 169
E +G+ L C +P+SD+ +ET E+++
Sbjct: 119 EQIGEGFVLTCAAYPTSDVTIETHKEEDI 147
>AT2G27510.1 | ferredoxin 3 | Chr2:11758281-11758748 REVERSE
LENGTH=155 | 201606
Length = 155
Score = 70.9 bits (172), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 89 EFLVPEDQYILHTAEAQNISLPFACRHGCCTSCAVRVKSGELRQPEALGISAELKSQGYA 148
EF V +DQYIL AE + LP++CR G C++CA ++ SG + Q + + +GY
Sbjct: 74 EFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYV 133
Query: 149 LLCVGFPSSDLEVETQDEDEVY 170
L CV +P SD + T E E++
Sbjct: 134 LTCVAYPQSDCVIHTHKETELF 155