BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2970.1
(581 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76390.2 | ARM repeat superfamily protein | Chr1:28655914-286... 160 2e-41
AT1G76390.1 | ARM repeat superfamily protein | Chr1:28655914-286... 160 2e-41
AT1G20780.3 | senescence-associated E3 ubiquitin ligase 1 | Chr1... 149 1e-37
AT1G20780.2 | senescence-associated E3 ubiquitin ligase 1 | Chr1... 149 1e-37
AT1G20780.1 | senescence-associated E3 ubiquitin ligase 1 | Chr1... 149 1e-37
>AT1G76390.2 | ARM repeat superfamily protein |
Chr1:28655914-28658531 FORWARD LENGTH=811 | 201606
Length = 811
Score = 160 bits (405), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 179/621 (28%), Positives = 306/621 (49%), Gaps = 47/621 (7%)
Query: 6 SLSIFVKSLVRNAEESREA-MGLLLVVSDIVEVRQRIGRIKGCIIMLVTLLNGDDPIASS 64
++ VK L + + REA + +L +S + ++IG I G II+LV L + S+
Sbjct: 189 TVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVST 248
Query: 65 --DASILLNALSSNTQDVLHMAEAGYFRPLVRHLVEGSDMSKVLMATALSRMVLTDQSRA 122
A L L + ++V MA G +PL+ L+EGS +KV MA L + L + +
Sbjct: 249 VEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKV 308
Query: 123 TLGEE-GSIKPLVEMLNSGKLEAKISALGALRNLSSLKENIERLVNSGIVATLLKLLFSV 181
+ + GS L++++ + + + +ALGAL N+SS + + + L+N+GI+ L+K LF V
Sbjct: 309 IVAQTVGS--SLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYV 366
Query: 182 --TSVLMTLREPASAILASIAQ-----SKSILGNH-------DIANQMLSLLNLSQPTVQ 227
+ + L+E ++ ILA+I K +G H +I +L L + + P +Q
Sbjct: 367 GPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQ 426
Query: 228 YHLLRALNSIISHSRSS-RVRAKMKKNGGIQLLLPFLS-EDNIEIRMSSLNLLYNLTKDL 285
LL L + S S V + ++ + I L+ F+ +N ++R++S+ LL+N++ +
Sbjct: 427 GKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHM 486
Query: 286 SGDLTEQLGETYIKI--IVNIIS--TSTVESEKAACFGILCNVPVSDKKAT-DMLKKANI 340
S +L L T ++ +V+IIS T T+ E+AA G+L +P D T +L++
Sbjct: 487 SEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAF 546
Query: 341 LPILISILCVSTKSSTPV--ENLLLENVAGVLLR--FTISSDKKLQLFSAEQGIIPLLVK 396
I+ I+ + + E LE + +L R F ++ + LF E+ + L +
Sbjct: 547 EKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLD 606
Query: 397 SLSVGSII-VQSRAATSLAQLSQNSFSLSK--------SRTSKWSCISPSS---EFCKVH 444
L S +Q +AT+L LS S +L+K S +SC+S CK+H
Sbjct: 607 LLQSNSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIH 666
Query: 445 DGYCFIKTSFCLIKSGAVPPLIRILEGKERDADEAVLGALATLMQDEI-WVEGSNVIVEA 503
G C ++ SFCL++ AV L+ +L+ + L AL+TL++D + V+G +I EA
Sbjct: 667 QGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEA 726
Query: 504 SGIEAFISV-LELGTLKAQEKVVWFLERIFRVE--AHRVKYGGLAQPILIELTQKGSSSL 560
GI ++V LE T + + VW +ERI R+E A V L++ Q
Sbjct: 727 DGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRT 786
Query: 561 KPTIAKILAHLDLLQVQSSYF 581
+ K L H+D + S F
Sbjct: 787 RQIAEKALRHIDKIPNFSGIF 807
>AT1G76390.1 | ARM repeat superfamily protein |
Chr1:28655914-28658531 FORWARD LENGTH=811 | 201606
Length = 811
Score = 160 bits (405), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 179/621 (28%), Positives = 306/621 (49%), Gaps = 47/621 (7%)
Query: 6 SLSIFVKSLVRNAEESREA-MGLLLVVSDIVEVRQRIGRIKGCIIMLVTLLNGDDPIASS 64
++ VK L + + REA + +L +S + ++IG I G II+LV L + S+
Sbjct: 189 TVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVST 248
Query: 65 --DASILLNALSSNTQDVLHMAEAGYFRPLVRHLVEGSDMSKVLMATALSRMVLTDQSRA 122
A L L + ++V MA G +PL+ L+EGS +KV MA L + L + +
Sbjct: 249 VEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKV 308
Query: 123 TLGEE-GSIKPLVEMLNSGKLEAKISALGALRNLSSLKENIERLVNSGIVATLLKLLFSV 181
+ + GS L++++ + + + +ALGAL N+SS + + + L+N+GI+ L+K LF V
Sbjct: 309 IVAQTVGS--SLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYV 366
Query: 182 --TSVLMTLREPASAILASIAQ-----SKSILGNH-------DIANQMLSLLNLSQPTVQ 227
+ + L+E ++ ILA+I K +G H +I +L L + + P +Q
Sbjct: 367 GPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQ 426
Query: 228 YHLLRALNSIISHSRSS-RVRAKMKKNGGIQLLLPFLS-EDNIEIRMSSLNLLYNLTKDL 285
LL L + S S V + ++ + I L+ F+ +N ++R++S+ LL+N++ +
Sbjct: 427 GKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHM 486
Query: 286 SGDLTEQLGETYIKI--IVNIIS--TSTVESEKAACFGILCNVPVSDKKAT-DMLKKANI 340
S +L L T ++ +V+IIS T T+ E+AA G+L +P D T +L++
Sbjct: 487 SEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAF 546
Query: 341 LPILISILCVSTKSSTPV--ENLLLENVAGVLLR--FTISSDKKLQLFSAEQGIIPLLVK 396
I+ I+ + + E LE + +L R F ++ + LF E+ + L +
Sbjct: 547 EKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLD 606
Query: 397 SLSVGSII-VQSRAATSLAQLSQNSFSLSK--------SRTSKWSCISPSS---EFCKVH 444
L S +Q +AT+L LS S +L+K S +SC+S CK+H
Sbjct: 607 LLQSNSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIH 666
Query: 445 DGYCFIKTSFCLIKSGAVPPLIRILEGKERDADEAVLGALATLMQDEI-WVEGSNVIVEA 503
G C ++ SFCL++ AV L+ +L+ + L AL+TL++D + V+G +I EA
Sbjct: 667 QGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEA 726
Query: 504 SGIEAFISV-LELGTLKAQEKVVWFLERIFRVE--AHRVKYGGLAQPILIELTQKGSSSL 560
GI ++V LE T + + VW +ERI R+E A V L++ Q
Sbjct: 727 DGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRT 786
Query: 561 KPTIAKILAHLDLLQVQSSYF 581
+ K L H+D + S F
Sbjct: 787 RQIAEKALRHIDKIPNFSGIF 807
>AT1G20780.3 | senescence-associated E3 ubiquitin ligase 1 |
Chr1:7217812-7220609 FORWARD LENGTH=801 | 201606
Length = 801
Score = 149 bits (376), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 175/613 (28%), Positives = 305/613 (49%), Gaps = 39/613 (6%)
Query: 6 SLSIFVKSLVRNAEESREA-MGLLLVVSDIVEVRQRIGRIKGCIIMLVTLL--NGDDPIA 62
++ VK L + REA + LL +S + ++IG I G +I+LV L N ++
Sbjct: 187 TVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSI 246
Query: 63 SSDASILLNALSSNTQDVLHMAEAGYFRPLVRHLVEGSDMSKVLMATALSRMVLTDQSRA 122
A L + + + V MA G +PL+ L+EGS +K+ MA+ L + L + +
Sbjct: 247 VEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKV 306
Query: 123 TLGEE-GSIKPLVEMLNSGKLEAKISALGALRNLSSLKENIERLVNSGIVATLLKLLFSV 181
+ + GS LV+++ SG + + +AL AL +SS + + + L++ GI+ L+K LF V
Sbjct: 307 LVAQTVGS--SLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYV 364
Query: 182 --TSVLMTLREPASAILASIAQ-----SKSILGNHDIANQMLSLLNLSQPTVQYHLLRAL 234
++ + L+E ++ ILA+I K+ L + + +L L++ + P +Q LL L
Sbjct: 365 GPNNLPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVL 424
Query: 235 NSIISHSRS-SRVRAKMKKNGGIQLLLPFLS-EDNIEIRMSSLNLLYNLTKDLSGDLTEQ 292
+ S ++ +V +K +G I L+ F+ +N ++R++S+ LL+NL+ +S +L +
Sbjct: 425 VGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKA 484
Query: 293 LGETYIKI--IVNIISTST-VESEKAACFGILCNVPVSDKKAT-DMLKKANILPILISIL 348
L T ++ +V IIS T + E+AA G+L +P D T +ML+ I+ +
Sbjct: 485 LCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVF 544
Query: 349 CVSTKSSTPVE--NLLLENVAGVLLRFTISSDKKLQL--FSAEQGIIPLLVKSL-SVGSI 403
+ + N LE + +L R T +K+ + F E + L + L S G
Sbjct: 545 GIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQD 604
Query: 404 IVQSRAATSLAQLSQNSFSLSKSRT--------SKWSCISPS---SEFCKVHDGYCFIKT 452
+Q +A +L LS S L++ S +SC+ + CK+H G C ++
Sbjct: 605 NIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRE 664
Query: 453 SFCLIKSGAVPPLIRILEGKERDADEAVLGALATLMQDEIWVE-GSNVIVEASGIEAFIS 511
+FCL++ GAV L+ +L+ + EA L AL++L++D + VE G ++ EA GI ++
Sbjct: 665 TFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILN 724
Query: 512 VL-ELGTLKAQEKVVWFLERIFRVE--AHRVKYGGLAQPILIELTQKGSSSLKPTIAKIL 568
VL E T + + VW +ERI R+E A V L++ Q + L
Sbjct: 725 VLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENAL 784
Query: 569 AHLDLLQVQSSYF 581
H+D + SS F
Sbjct: 785 KHIDKIPNFSSIF 797
>AT1G20780.2 | senescence-associated E3 ubiquitin ligase 1 |
Chr1:7217812-7220609 FORWARD LENGTH=801 | 201606
Length = 801
Score = 149 bits (376), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 175/613 (28%), Positives = 305/613 (49%), Gaps = 39/613 (6%)
Query: 6 SLSIFVKSLVRNAEESREA-MGLLLVVSDIVEVRQRIGRIKGCIIMLVTLL--NGDDPIA 62
++ VK L + REA + LL +S + ++IG I G +I+LV L N ++
Sbjct: 187 TVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSI 246
Query: 63 SSDASILLNALSSNTQDVLHMAEAGYFRPLVRHLVEGSDMSKVLMATALSRMVLTDQSRA 122
A L + + + V MA G +PL+ L+EGS +K+ MA+ L + L + +
Sbjct: 247 VEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKV 306
Query: 123 TLGEE-GSIKPLVEMLNSGKLEAKISALGALRNLSSLKENIERLVNSGIVATLLKLLFSV 181
+ + GS LV+++ SG + + +AL AL +SS + + + L++ GI+ L+K LF V
Sbjct: 307 LVAQTVGS--SLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYV 364
Query: 182 --TSVLMTLREPASAILASIAQ-----SKSILGNHDIANQMLSLLNLSQPTVQYHLLRAL 234
++ + L+E ++ ILA+I K+ L + + +L L++ + P +Q LL L
Sbjct: 365 GPNNLPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVL 424
Query: 235 NSIISHSRS-SRVRAKMKKNGGIQLLLPFLS-EDNIEIRMSSLNLLYNLTKDLSGDLTEQ 292
+ S ++ +V +K +G I L+ F+ +N ++R++S+ LL+NL+ +S +L +
Sbjct: 425 VGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKA 484
Query: 293 LGETYIKI--IVNIISTST-VESEKAACFGILCNVPVSDKKAT-DMLKKANILPILISIL 348
L T ++ +V IIS T + E+AA G+L +P D T +ML+ I+ +
Sbjct: 485 LCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVF 544
Query: 349 CVSTKSSTPVE--NLLLENVAGVLLRFTISSDKKLQL--FSAEQGIIPLLVKSL-SVGSI 403
+ + N LE + +L R T +K+ + F E + L + L S G
Sbjct: 545 GIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQD 604
Query: 404 IVQSRAATSLAQLSQNSFSLSKSRT--------SKWSCISPS---SEFCKVHDGYCFIKT 452
+Q +A +L LS S L++ S +SC+ + CK+H G C ++
Sbjct: 605 NIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRE 664
Query: 453 SFCLIKSGAVPPLIRILEGKERDADEAVLGALATLMQDEIWVE-GSNVIVEASGIEAFIS 511
+FCL++ GAV L+ +L+ + EA L AL++L++D + VE G ++ EA GI ++
Sbjct: 665 TFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILN 724
Query: 512 VL-ELGTLKAQEKVVWFLERIFRVE--AHRVKYGGLAQPILIELTQKGSSSLKPTIAKIL 568
VL E T + + VW +ERI R+E A V L++ Q + L
Sbjct: 725 VLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENAL 784
Query: 569 AHLDLLQVQSSYF 581
H+D + SS F
Sbjct: 785 KHIDKIPNFSSIF 797
>AT1G20780.1 | senescence-associated E3 ubiquitin ligase 1 |
Chr1:7217812-7220609 FORWARD LENGTH=801 | 201606
Length = 801
Score = 149 bits (376), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 175/613 (28%), Positives = 305/613 (49%), Gaps = 39/613 (6%)
Query: 6 SLSIFVKSLVRNAEESREA-MGLLLVVSDIVEVRQRIGRIKGCIIMLVTLL--NGDDPIA 62
++ VK L + REA + LL +S + ++IG I G +I+LV L N ++
Sbjct: 187 TVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSI 246
Query: 63 SSDASILLNALSSNTQDVLHMAEAGYFRPLVRHLVEGSDMSKVLMATALSRMVLTDQSRA 122
A L + + + V MA G +PL+ L+EGS +K+ MA+ L + L + +
Sbjct: 247 VEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKV 306
Query: 123 TLGEE-GSIKPLVEMLNSGKLEAKISALGALRNLSSLKENIERLVNSGIVATLLKLLFSV 181
+ + GS LV+++ SG + + +AL AL +SS + + + L++ GI+ L+K LF V
Sbjct: 307 LVAQTVGS--SLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYV 364
Query: 182 --TSVLMTLREPASAILASIAQ-----SKSILGNHDIANQMLSLLNLSQPTVQYHLLRAL 234
++ + L+E ++ ILA+I K+ L + + +L L++ + P +Q LL L
Sbjct: 365 GPNNLPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVL 424
Query: 235 NSIISHSRS-SRVRAKMKKNGGIQLLLPFLS-EDNIEIRMSSLNLLYNLTKDLSGDLTEQ 292
+ S ++ +V +K +G I L+ F+ +N ++R++S+ LL+NL+ +S +L +
Sbjct: 425 VGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKA 484
Query: 293 LGETYIKI--IVNIISTST-VESEKAACFGILCNVPVSDKKAT-DMLKKANILPILISIL 348
L T ++ +V IIS T + E+AA G+L +P D T +ML+ I+ +
Sbjct: 485 LCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVF 544
Query: 349 CVSTKSSTPVE--NLLLENVAGVLLRFTISSDKKLQL--FSAEQGIIPLLVKSL-SVGSI 403
+ + N LE + +L R T +K+ + F E + L + L S G
Sbjct: 545 GIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQD 604
Query: 404 IVQSRAATSLAQLSQNSFSLSKSRT--------SKWSCISPS---SEFCKVHDGYCFIKT 452
+Q +A +L LS S L++ S +SC+ + CK+H G C ++
Sbjct: 605 NIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRE 664
Query: 453 SFCLIKSGAVPPLIRILEGKERDADEAVLGALATLMQDEIWVE-GSNVIVEASGIEAFIS 511
+FCL++ GAV L+ +L+ + EA L AL++L++D + VE G ++ EA GI ++
Sbjct: 665 TFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILN 724
Query: 512 VL-ELGTLKAQEKVVWFLERIFRVE--AHRVKYGGLAQPILIELTQKGSSSLKPTIAKIL 568
VL E T + + VW +ERI R+E A V L++ Q + L
Sbjct: 725 VLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENAL 784
Query: 569 AHLDLLQVQSSYF 581
H+D + SS F
Sbjct: 785 KHIDKIPNFSSIF 797