BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3090.1
(1433 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 434 e-132
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 434 e-132
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 259 2e-78
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 132 4e-35
AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947... 89 5e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 434 bits (1117), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 328/550 (59%), Gaps = 22/550 (4%)
Query: 887 SIHPMQTRSKSGIHKPKSYL----AATKHPISSSLEIDSLPP-------------TPTCF 929
S+H R++ + Y + T H IS L + + P P+ +
Sbjct: 30 SVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTY 89
Query: 930 TQANKDPNWKEAMATEFKALEDLNTWSLVPPSPNQNLVGCKWVFKLKQKSDGTIERYKAR 989
+A + W AM E A+E +TW + PN+ +GCKWV+K+K SDGTIERYKAR
Sbjct: 90 NEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKAR 149
Query: 990 LVAKGFHQREGIDYSETFSPVAKPTTIRVLLSLATQNDWMIKQLDVSNAFLHGHLKEEVY 1049
LVAKG+ Q+EGID+ ETFSPV K T+++++L+++ ++ + QLD+SNAFL+G L EE+Y
Sbjct: 150 LVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIY 209
Query: 1050 MTQPPGFQ----DKSRPNYVCKLHKSLYGLKQAPRAWYEELVDSLLAFGFQKSFSDTSLF 1105
M PPG+ D PN VC L KS+YGLKQA R W+ + +L+ FGF +S SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 1106 VYSNNGVLLYVLVYVDDILVTGNSSSACASLIATLSSQFAMKDLGPLHYFLGMEVKRDKS 1165
+ + L VLVYVDDI++ N+ +A L + L S F ++DLGPL YFLG+E+ R +
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 1166 GLYLTQTKYTLDLLKKAQMADAKPCSTPLPHRTKLSPNEGDLLDDPTHYRSLVGALQYLT 1225
G+ + Q KY LDLL + + KP S P+ S + G D YR L+G L YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 1226 WTRPDINFSVNLVCQFMSQPRTSHLLAVKRILRYLKGTVNYGLHFSKSDSLDLQAYADAD 1285
TR DI+F+VN + QF PR +H AV +IL Y+KGTV GL +S + LQ ++DA
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 1286 WAGSACDSRSTSGFIIYLGGNSISWSAKKQPTVSRSSTEAEYRSLAQSAAEVLWICSLLQ 1345
+ RST+G+ ++LG + ISW +KKQ VS+SS EAEYR+L+ + E++W+ +
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 1346 DLHVFISTPPMLWCDNVSALALASNPVFHSKIKHLALDFHFIRELVINKRIKLSYVPTSS 1405
+L + +S P +L+CDN +A+ +A+N VFH + KH+ D H +RE + + LSY +
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQ-ATLSYSFQAY 568
Query: 1406 QPADVLTKAL 1415
D T+ L
Sbjct: 569 DEQDGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 434 bits (1117), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 328/550 (59%), Gaps = 22/550 (4%)
Query: 887 SIHPMQTRSKSGIHKPKSYL----AATKHPISSSLEIDSLPP-------------TPTCF 929
S+H R++ + Y + T H IS L + + P P+ +
Sbjct: 30 SVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTY 89
Query: 930 TQANKDPNWKEAMATEFKALEDLNTWSLVPPSPNQNLVGCKWVFKLKQKSDGTIERYKAR 989
+A + W AM E A+E +TW + PN+ +GCKWV+K+K SDGTIERYKAR
Sbjct: 90 NEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKAR 149
Query: 990 LVAKGFHQREGIDYSETFSPVAKPTTIRVLLSLATQNDWMIKQLDVSNAFLHGHLKEEVY 1049
LVAKG+ Q+EGID+ ETFSPV K T+++++L+++ ++ + QLD+SNAFL+G L EE+Y
Sbjct: 150 LVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIY 209
Query: 1050 MTQPPGFQ----DKSRPNYVCKLHKSLYGLKQAPRAWYEELVDSLLAFGFQKSFSDTSLF 1105
M PPG+ D PN VC L KS+YGLKQA R W+ + +L+ FGF +S SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 1106 VYSNNGVLLYVLVYVDDILVTGNSSSACASLIATLSSQFAMKDLGPLHYFLGMEVKRDKS 1165
+ + L VLVYVDDI++ N+ +A L + L S F ++DLGPL YFLG+E+ R +
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 1166 GLYLTQTKYTLDLLKKAQMADAKPCSTPLPHRTKLSPNEGDLLDDPTHYRSLVGALQYLT 1225
G+ + Q KY LDLL + + KP S P+ S + G D YR L+G L YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 1226 WTRPDINFSVNLVCQFMSQPRTSHLLAVKRILRYLKGTVNYGLHFSKSDSLDLQAYADAD 1285
TR DI+F+VN + QF PR +H AV +IL Y+KGTV GL +S + LQ ++DA
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 1286 WAGSACDSRSTSGFIIYLGGNSISWSAKKQPTVSRSSTEAEYRSLAQSAAEVLWICSLLQ 1345
+ RST+G+ ++LG + ISW +KKQ VS+SS EAEYR+L+ + E++W+ +
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 1346 DLHVFISTPPMLWCDNVSALALASNPVFHSKIKHLALDFHFIRELVINKRIKLSYVPTSS 1405
+L + +S P +L+CDN +A+ +A+N VFH + KH+ D H +RE + + LSY +
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQ-ATLSYSFQAY 568
Query: 1406 QPADVLTKAL 1415
D T+ L
Sbjct: 569 DEQDGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 259 bits (662), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 168/226 (74%), Gaps = 1/226 (0%)
Query: 1114 LYVLVYVDDILVTGNSSSACASLIATLSSQFAMKDLGPLHYFLGMEVKRDKSGLYLTQTK 1173
+Y+L+YVDDIL+TG+S++ LI LSS F+MKDLGP+HYFLG+++K SGL+L+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1174 YTLDLLKKAQMADAKPCSTPLPHRTKLSPNEGDLLDDPTHYRSLVGALQYLTWTRPDINF 1233
Y +L A M D KP STPLP + S + DP+ +RS+VGALQYLT TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1234 SVNLVCQFMSQPRTSHLLAVKRILRYLKGTVNYGLHFSKSDSLDLQAYADADWAGSACDS 1293
+VN+VCQ M +P + +KR+LRY+KGT+ +GL+ K+ L++QA+ D+DWAG
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1294 RSTSGFIIYLGGNSISWSAKKQPTVSRSSTEAEYRSLAQSAAEVLW 1339
RST+GF +LG N ISWSAK+QPTVSRSSTE EYR+LA +AAE+ W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 132 bits (333), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 18/149 (12%)
Query: 891 MQTRSKSGIHK--PKSYLAATKHPISSSLEIDSLPPTPTCFTQANKDPNWKEAMATEFKA 948
M TRSK+GI+K PK L T ++ P A KDP W +AM E A
Sbjct: 1 MLTRSKAGINKLNPKYSLTIT----------TTIKKEPKSVIFALKDPGWCQAMQEELDA 50
Query: 949 LEDLNTWSLVPPSPNQNLVGCKWVFKLKQKSDGTIERYKARLVAKGFHQREGIDYSETFS 1008
L TW LVPP NQN++GCKWVFK K SDGT++R KARLVAKGFHQ EGI + ET+S
Sbjct: 51 LSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYS 110
Query: 1009 PVAKPTTIRVLLSLATQND------WMIK 1031
PV + TIR +L++A Q + WM K
Sbjct: 111 PVVRTATIRTILNVAQQLEVGQSINWMFK 139
>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
Length = 369
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 20/246 (8%)
Query: 18 IPIKLQSDNYLAWRSLFLPILKKYNVLDLINGSR-PQPDQFLDEEKKEINPDYLDWLEED 76
+ + L NY WR LF + + VL I+GS P P + E++ W E D
Sbjct: 24 VTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSSTPTP---MTEKR---------WKERD 71
Query: 77 QTLLIWINSTLSDSVIPYVIG-NTTSQELWQNLEDSFAAASTSHIFQLQENLRDLKKDTD 135
+ +WI T++DS++ +I T+++LW +LE+ F + Q + LR D
Sbjct: 72 GLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDL 131
Query: 136 KMPEFLAKVKKISDSLAAAGSPASSVELVVSILRALPPEYDSFSAAIRLRKPPVSVPELQ 195
+ E+ K+K +SD L SP S LV+ +L L +YD I+ + P S E +
Sbjct: 132 SVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEAR 191
Query: 196 NLLISEEITISERQKRSMLNVNH-----ALFTNPHSSQSSSFNRFNQPRSGTGNSSNQSN 250
++L+ EE +S + K S+ + NH LFT P Q ++ S G ++
Sbjct: 192 SMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPR-QQERYPQEYHNNNSNMGRGRSKKK 250
Query: 251 NRFRGS 256
NR GS
Sbjct: 251 NRGGGS 256