BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3110.1
(1073 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 320 6e-93
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 320 6e-93
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 117 6e-29
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 81 2e-17
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 69 1e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 320 bits (820), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 278/489 (56%), Gaps = 19/489 (3%)
Query: 476 VLLTDGGEPESFNEALEDEHKHEWWKSMRDEMDSLEENHTFELVKLPQGKRALLNRWVYR 535
V + EP ++NEA E W +M DE+ ++E HT+E+ LP K+ + +WVY+
Sbjct: 78 VCIAKAKEPSTYNEAKE---FLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 536 VKHEETMLLPRYKARLVVKGFSQRKGIDFDEIFSPVVKMSSIRVAIGLAASLDLEVEQID 595
+K+ + RYKARLV KG++Q++GIDF E FSPV K++S+++ + ++A + + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 596 VKTAFLHGDLEEEIYMMQPEGFVKKGKE----DYVCRLKKSLYGLKQAPRQWYKKFESVM 651
+ AFL+GDL+EEIYM P G+ + + + VC LKKS+YGLKQA RQW+ KF +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 652 GEHGYNKTTSDHCVFVQRFGEGDFIILLLYVDDMLIVGRNSRRILELKKQLSKFFAMKDL 711
G+ ++ SDH F+ + F+ +L+YVDD++I N + ELK QL F ++DL
Sbjct: 255 IGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 712 GPAKQILGIRIVRDRENKLIYLSQEKYIEKILQRFCMDKSKVVSTPLAGHFRLSSQHSPS 771
GP K LG+ I R I + Q KY +L + K S P+ S+ HS
Sbjct: 314 GPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA-HSGG 370
Query: 772 TDSELEAMERVPYASAVGSLMYAMVCTRPDIAHAVGTVSWFLSNRGKEHWAAVKWILRYL 831
+ +A R+ +G LMY + TR DI+ AV +S F H AV IL Y+
Sbjct: 371 DFVDAKAYRRL-----IGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424
Query: 832 RGTSGLKLTFGGDRPL-LVSYTDADMAGDVDSRKSTSGYLVTFAGGAVAWQSRLQKCVAL 890
+GT G L + + L ++DA D+R+ST+GY + ++W+S+ Q+ V+
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484
Query: 891 STAEAEFIATTEACKELLWMKNYLEEIGFNQDKYVLL-CDSQSAIHLGKNSTFHSRSKHI 949
S+AEAE+ A + A E++W+ + E+ K LL CD+ +AIH+ N+ FH R+KHI
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544
Query: 950 DVRYHWIRD 958
+ H +R+
Sbjct: 545 ESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 320 bits (820), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 278/489 (56%), Gaps = 19/489 (3%)
Query: 476 VLLTDGGEPESFNEALEDEHKHEWWKSMRDEMDSLEENHTFELVKLPQGKRALLNRWVYR 535
V + EP ++NEA E W +M DE+ ++E HT+E+ LP K+ + +WVY+
Sbjct: 78 VCIAKAKEPSTYNEAKE---FLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 536 VKHEETMLLPRYKARLVVKGFSQRKGIDFDEIFSPVVKMSSIRVAIGLAASLDLEVEQID 595
+K+ + RYKARLV KG++Q++GIDF E FSPV K++S+++ + ++A + + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 596 VKTAFLHGDLEEEIYMMQPEGFVKKGKE----DYVCRLKKSLYGLKQAPRQWYKKFESVM 651
+ AFL+GDL+EEIYM P G+ + + + VC LKKS+YGLKQA RQW+ KF +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 652 GEHGYNKTTSDHCVFVQRFGEGDFIILLLYVDDMLIVGRNSRRILELKKQLSKFFAMKDL 711
G+ ++ SDH F+ + F+ +L+YVDD++I N + ELK QL F ++DL
Sbjct: 255 IGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 712 GPAKQILGIRIVRDRENKLIYLSQEKYIEKILQRFCMDKSKVVSTPLAGHFRLSSQHSPS 771
GP K LG+ I R I + Q KY +L + K S P+ S+ HS
Sbjct: 314 GPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA-HSGG 370
Query: 772 TDSELEAMERVPYASAVGSLMYAMVCTRPDIAHAVGTVSWFLSNRGKEHWAAVKWILRYL 831
+ +A R+ +G LMY + TR DI+ AV +S F H AV IL Y+
Sbjct: 371 DFVDAKAYRRL-----IGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424
Query: 832 RGTSGLKLTFGGDRPL-LVSYTDADMAGDVDSRKSTSGYLVTFAGGAVAWQSRLQKCVAL 890
+GT G L + + L ++DA D+R+ST+GY + ++W+S+ Q+ V+
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484
Query: 891 STAEAEFIATTEACKELLWMKNYLEEIGFNQDKYVLL-CDSQSAIHLGKNSTFHSRSKHI 949
S+AEAE+ A + A E++W+ + E+ K LL CD+ +AIH+ N+ FH R+KHI
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544
Query: 950 DVRYHWIRD 958
+ H +R+
Sbjct: 545 ESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 117 bits (292), Expect = 6e-29, Method: Composition-based stats.
Identities = 83/233 (35%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 678 LLLYVDDMLIVGRNSRRILELKKQLSKFFAMKDLGPAKQILGIRIVRDRENKLIYLSQEK 737
LLLYVDD+L+ G ++ + L QLS F+MKDLGP LGI+I ++LSQ K
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60
Query: 738 YIEKILQRFCMDKSKVVSTPLAGHFRLSSQHSPSTDSELEAMERVPYASAVGSLMYAMVC 797
Y E+IL M K +STPL +L+S S ST + + + S VG+L Y +
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP--LKLNS--SVSTAKYPDPSD---FRSIVGALQY-LTL 112
Query: 798 TRPDIAHAVGTVSWFLSNRGKEHWAAVKWILRYLRGTSGLKLTFGGDRPLLV-SYTDADM 856
TRPDI++AV V + + +K +LRY++GT L + L V ++ D+D
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172
Query: 857 AGDVDSRKSTSGYLVTFAGGAVAWQSRLQKCVALSTAEAEFIATTEACKELLW 909
AG +R+ST+G+ ++W ++ Q V+ S+ E E+ A EL W
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 81.3 bits (199), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
Query: 459 RSERGLRR-STRYDPSEYVLLTDGGEPESFNEALEDEHKHEWWKSMRDEMDSLEENHTFE 517
RS+ G+ + + +Y S + T EP+S AL+D W ++M++E+D+L N T+
Sbjct: 4 RSKAGINKLNPKY--SLTITTTIKKEPKSVIFALKDP---GWCQAMQEELDALSRNKTWI 58
Query: 518 LVKLPQGKRALLNRWVYRVKHEETMLLPRYKARLVVKGFSQRKGIDFDEIFSPVVKMSSI 577
LV P + L +WV++ K L R KARLV KGF Q +GI F E +SPVV+ ++I
Sbjct: 59 LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118
Query: 578 RVAIGLAASLDL 589
R + +A L++
Sbjct: 119 RTILNVAQQLEV 130
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 69.3 bits (168), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 265 MNRTIVERVRCLISQSGLAQTFWGEALSSVVHVLNLSPSAPLEGDSPERVWTGKDISYGH 324
MNRTI+E+VR ++ + GL +TF +A ++ VH++N PS + P+ VW +Y +
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 325 LKVFGCKAFVH 335
L+ FGC A++H
Sbjct: 61 LRRFGCVAYIH 71