BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3150.1
(304 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63260.2 | tetraspanin10 | Chr1:23466975-23468945 REVERSE LEN... 404 e-143
AT1G63260.6 | tetraspanin10 | Chr1:23467105-23468945 REVERSE LEN... 394 e-139
AT1G63260.1 | tetraspanin10 | Chr1:23467105-23468945 REVERSE LEN... 394 e-139
AT1G63260.3 | tetraspanin10 | Chr1:23466994-23468945 REVERSE LEN... 392 e-138
AT1G63260.5 | tetraspanin10 | Chr1:23467407-23468945 REVERSE LEN... 346 e-121
>AT1G63260.2 | tetraspanin10 | Chr1:23466975-23468945 REVERSE
LENGTH=258 | 201606
Length = 258
Score = 404 bits (1039), Expect = e-143, Method: Compositional matrix adjust.
Identities = 188/261 (72%), Positives = 216/261 (82%), Gaps = 6/261 (2%)
Query: 1 MGMGTSTFLVRWINFLTMLLAVAIVCFGVWMSTHHDGCRKSLTLPILGVGAFILLISLIG 60
MGMGTSTF++RW+N LTMLLAVA++ FGVWMSTH+DGCR+SLT P++ +G FI LIS+IG
Sbjct: 1 MGMGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIG 60
Query: 61 YLGAYKNVAILLWIYLAILALILVGILVFTVLAFIITNNGSGHMVAGLRYKEYQLQDYSS 120
+LGA K LLWIYLA+L ++L+ ILVFTVLAFI+TNNGSGH GLRYKEY+L DYSS
Sbjct: 61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120
Query: 121 WFVKHLNDTQNWKHLKSCLVHSADCNNLPKKYKTLREYKGAMLTPIEAGCCRPPSECGYP 180
WF+K LN+T NW LKSCLV S C L KKYKT+++ K A LTPIEAGCCRPPSECGYP
Sbjct: 121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYP 180
Query: 181 AKNASYYDLSFHPISTANDCKLYKNTRAIKCYNCDSCKAGVAQYMKTEWRVIAIFNVILF 240
A NASYYDLSFH IS+ DCKLYKN R IKCYNCDSCKAGVAQYMKTEWR++AIFNV
Sbjct: 181 AVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNV--- 237
Query: 241 VALSIVYLLGCCARRNAARNR 261
S+VY +GCCARRNAA R
Sbjct: 238 ---SMVYFVGCCARRNAASYR 255
>AT1G63260.6 | tetraspanin10 | Chr1:23467105-23468945 REVERSE
LENGTH=284 | 201606
Length = 284
Score = 394 bits (1011), Expect = e-139, Method: Compositional matrix adjust.
Identities = 179/243 (73%), Positives = 206/243 (84%)
Query: 1 MGMGTSTFLVRWINFLTMLLAVAIVCFGVWMSTHHDGCRKSLTLPILGVGAFILLISLIG 60
MGMGTSTF++RW+N LTMLLAVA++ FGVWMSTH+DGCR+SLT P++ +G FI LIS+IG
Sbjct: 1 MGMGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIG 60
Query: 61 YLGAYKNVAILLWIYLAILALILVGILVFTVLAFIITNNGSGHMVAGLRYKEYQLQDYSS 120
+LGA K LLWIYLA+L ++L+ ILVFTVLAFI+TNNGSGH GLRYKEY+L DYSS
Sbjct: 61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120
Query: 121 WFVKHLNDTQNWKHLKSCLVHSADCNNLPKKYKTLREYKGAMLTPIEAGCCRPPSECGYP 180
WF+K LN+T NW LKSCLV S C L KKYKT+++ K A LTPIEAGCCRPPSECGYP
Sbjct: 121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYP 180
Query: 181 AKNASYYDLSFHPISTANDCKLYKNTRAIKCYNCDSCKAGVAQYMKTEWRVIAIFNVILF 240
A NASYYDLSFH IS+ DCKLYKN R IKCYNCDSCKAGVAQYMKTEWR++AIFNV+LF
Sbjct: 181 AVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLF 240
Query: 241 VAL 243
V L
Sbjct: 241 VVL 243
>AT1G63260.1 | tetraspanin10 | Chr1:23467105-23468945 REVERSE
LENGTH=284 | 201606
Length = 284
Score = 394 bits (1011), Expect = e-139, Method: Compositional matrix adjust.
Identities = 179/243 (73%), Positives = 206/243 (84%)
Query: 1 MGMGTSTFLVRWINFLTMLLAVAIVCFGVWMSTHHDGCRKSLTLPILGVGAFILLISLIG 60
MGMGTSTF++RW+N LTMLLAVA++ FGVWMSTH+DGCR+SLT P++ +G FI LIS+IG
Sbjct: 1 MGMGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIG 60
Query: 61 YLGAYKNVAILLWIYLAILALILVGILVFTVLAFIITNNGSGHMVAGLRYKEYQLQDYSS 120
+LGA K LLWIYLA+L ++L+ ILVFTVLAFI+TNNGSGH GLRYKEY+L DYSS
Sbjct: 61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120
Query: 121 WFVKHLNDTQNWKHLKSCLVHSADCNNLPKKYKTLREYKGAMLTPIEAGCCRPPSECGYP 180
WF+K LN+T NW LKSCLV S C L KKYKT+++ K A LTPIEAGCCRPPSECGYP
Sbjct: 121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYP 180
Query: 181 AKNASYYDLSFHPISTANDCKLYKNTRAIKCYNCDSCKAGVAQYMKTEWRVIAIFNVILF 240
A NASYYDLSFH IS+ DCKLYKN R IKCYNCDSCKAGVAQYMKTEWR++AIFNV+LF
Sbjct: 181 AVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLF 240
Query: 241 VAL 243
V L
Sbjct: 241 VVL 243
>AT1G63260.3 | tetraspanin10 | Chr1:23466994-23468945 REVERSE
LENGTH=277 | 201606
Length = 277
Score = 392 bits (1006), Expect = e-138, Method: Compositional matrix adjust.
Identities = 179/243 (73%), Positives = 206/243 (84%)
Query: 1 MGMGTSTFLVRWINFLTMLLAVAIVCFGVWMSTHHDGCRKSLTLPILGVGAFILLISLIG 60
MGMGTSTF++RW+N LTMLLAVA++ FGVWMSTH+DGCR+SLT P++ +G FI LIS+IG
Sbjct: 1 MGMGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIG 60
Query: 61 YLGAYKNVAILLWIYLAILALILVGILVFTVLAFIITNNGSGHMVAGLRYKEYQLQDYSS 120
+LGA K LLWIYLA+L ++L+ ILVFTVLAFI+TNNGSGH GLRYKEY+L DYSS
Sbjct: 61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120
Query: 121 WFVKHLNDTQNWKHLKSCLVHSADCNNLPKKYKTLREYKGAMLTPIEAGCCRPPSECGYP 180
WF+K LN+T NW LKSCLV S C L KKYKT+++ K A LTPIEAGCCRPPSECGYP
Sbjct: 121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYP 180
Query: 181 AKNASYYDLSFHPISTANDCKLYKNTRAIKCYNCDSCKAGVAQYMKTEWRVIAIFNVILF 240
A NASYYDLSFH IS+ DCKLYKN R IKCYNCDSCKAGVAQYMKTEWR++AIFNV+LF
Sbjct: 181 AVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLF 240
Query: 241 VAL 243
V L
Sbjct: 241 VVL 243
>AT1G63260.5 | tetraspanin10 | Chr1:23467407-23468945 REVERSE
LENGTH=218 | 201606
Length = 218
Score = 346 bits (887), Expect = e-121, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 182/218 (83%)
Query: 1 MGMGTSTFLVRWINFLTMLLAVAIVCFGVWMSTHHDGCRKSLTLPILGVGAFILLISLIG 60
MGMGTSTF++RW+N LTMLLAVA++ FGVWMSTH+DGCR+SLT P++ +G FI LIS+IG
Sbjct: 1 MGMGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIG 60
Query: 61 YLGAYKNVAILLWIYLAILALILVGILVFTVLAFIITNNGSGHMVAGLRYKEYQLQDYSS 120
+LGA K LLWIYLA+L ++L+ ILVFTVLAFI+TNNGSGH GLRYKEY+L DYSS
Sbjct: 61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120
Query: 121 WFVKHLNDTQNWKHLKSCLVHSADCNNLPKKYKTLREYKGAMLTPIEAGCCRPPSECGYP 180
WF+K LN+T NW LKSCLV S C L KKYKT+++ K A LTPIEAGCCRPPSECGYP
Sbjct: 121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYP 180
Query: 181 AKNASYYDLSFHPISTANDCKLYKNTRAIKCYNCDSCK 218
A NASYYDLSFH IS+ DCKLYKN R IKCYNCDSCK
Sbjct: 181 AVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCK 218