BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3290.1
(349 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 262 2e-79
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 262 2e-79
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 123 6e-33
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 85 2e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 262 bits (670), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 201/335 (60%), Gaps = 9/335 (2%)
Query: 1 MNEEINAIEKNDTWELTNLPKGYKPIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGI 60
M++EI A+E TWE+ LP KPIG KWVYK K N+ G ++RYKARLVAKGY Q+ GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYSEVFAPVARMETIRLLISIAAQYSWKIYQLDVKSAFLNGILEEEIYVEQPLGY-VRKG 119
D+ E F+PV ++ +++L+++I+A Y++ ++QLD+ +AFLNG L+EEIY++ P GY R+G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 120 KE---DKVYKLKKALYGLKQAPRAWNARIDKYFQENGFEKCPHEHTLYMKVKEGGGMLFV 176
+ V LKK++YGLKQA R W + GF + +HT ++K+ LF+
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT---ATLFL 278
Query: 177 C--LYVDDLIFTGNDSRLFDEFKKSMIKEFDMTDIGLMGHFLGIEVKQMENGIFISQSGY 234
C +YVDD+I N+ DE K + F + D+G + +FLG+E+ + GI I Q Y
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338
Query: 235 AKEVLKRFKMESCNPVNTPLESGVELRKCSRRSDVDPTYFKSLIGSLRYLTCTRPDILYG 294
A ++L + C P + P++ V S VD ++ LIG L YL TR DI +
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 295 VGLVSRYMETPDESHLNVAKRLLRYIKGTLNMVYF 329
V +S++ E P +H ++L YIKGT+ F
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 262 bits (670), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 201/335 (60%), Gaps = 9/335 (2%)
Query: 1 MNEEINAIEKNDTWELTNLPKGYKPIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGI 60
M++EI A+E TWE+ LP KPIG KWVYK K N+ G ++RYKARLVAKGY Q+ GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYSEVFAPVARMETIRLLISIAAQYSWKIYQLDVKSAFLNGILEEEIYVEQPLGY-VRKG 119
D+ E F+PV ++ +++L+++I+A Y++ ++QLD+ +AFLNG L+EEIY++ P GY R+G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 120 KE---DKVYKLKKALYGLKQAPRAWNARIDKYFQENGFEKCPHEHTLYMKVKEGGGMLFV 176
+ V LKK++YGLKQA R W + GF + +HT ++K+ LF+
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT---ATLFL 278
Query: 177 C--LYVDDLIFTGNDSRLFDEFKKSMIKEFDMTDIGLMGHFLGIEVKQMENGIFISQSGY 234
C +YVDD+I N+ DE K + F + D+G + +FLG+E+ + GI I Q Y
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338
Query: 235 AKEVLKRFKMESCNPVNTPLESGVELRKCSRRSDVDPTYFKSLIGSLRYLTCTRPDILYG 294
A ++L + C P + P++ V S VD ++ LIG L YL TR DI +
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 295 VGLVSRYMETPDESHLNVAKRLLRYIKGTLNMVYF 329
V +S++ E P +H ++L YIKGT+ F
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 123 bits (308), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 174 LFVCLYVDDLIFTGNDSRLFDEFKKSMIKEFDMTDIGLMGHFLGIEVKQMENGIFISQSG 233
+++ LYVDD++ TG+ + L + + F M D+G + +FLGI++K +G+F+SQ+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 234 YAKEVLKRFKMESCNPVNTPLESGVELRKCSRRSDVDPTYFKSLIGSLRYLTCTRPDILY 293
YA+++L M C P++TPL + S DP+ F+S++G+L+YLT TRPDI Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 294 GVGLVSRYMETPDESHLNVAKRLLRYIKGTL 324
V +V + M P + ++ KR+LRY+KGT+
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTI 150
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 84.7 bits (208), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%)
Query: 1 MNEEINAIEKNDTWELTNLPKGYKPIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGI 60
M EE++A+ +N TW L P +G KWV+KTK ++ G + R KARLVAKG+ Q GI
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYSEVFAPVARMETIRLLISIAAQ 84
+ E ++PV R TIR ++++A Q
Sbjct: 104 YFVETYSPVVRTATIRTILNVAQQ 127