BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g3310.1
         (197 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    52   1e-08

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 52.4 bits (124), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 49  NIQHGDAKCLNSIVKDESWLWHLRLGHLNLDGMKTLASKNMVRGLPCIDHPNKVCEGCIF 108
           +++ G++  L    KDE+ LWH RL H++  GM+ L  K  +          K CE CI+
Sbjct: 53  SVETGESN-LAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSL--KFCEDCIY 109

Query: 109 GKHHCTSFSKEGRWRASNILELVHTDVCG 137
           GK H  +FS  G+    N L+ VH+D+ G
Sbjct: 110 GKTHRVNFST-GQHTTKNPLDYVHSDLWG 137

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