BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3360.1
(195 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 131 3e-35
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 131 3e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 95 7e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 60 1e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 131 bits (329), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 87/141 (61%)
Query: 8 HLTAAHRVLRYLKGFICKGLLLYATSTLTISGYSDSDWVGCPSTRRSTTGYFTMLGFSPF 67
H A ++L Y+KG + +GL + + + + +SD+ + C TRRST GY LG S
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 68 SLKSKKQHIVARSSAEAEYRALATLTCELQWLKSLLQDFGISHPEPMPVHCDNKAASHKA 127
S KSKKQ +V++SSAEAEYRAL+ T E+ WL ++ + +P + CDN AA H A
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIA 532
Query: 128 DNLAFHERTKHIEIVCHLVRE 148
N FHERTKHIE CH VRE
Sbjct: 533 TNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 131 bits (329), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 87/141 (61%)
Query: 8 HLTAAHRVLRYLKGFICKGLLLYATSTLTISGYSDSDWVGCPSTRRSTTGYFTMLGFSPF 67
H A ++L Y+KG + +GL + + + + +SD+ + C TRRST GY LG S
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 68 SLKSKKQHIVARSSAEAEYRALATLTCELQWLKSLLQDFGISHPEPMPVHCDNKAASHKA 127
S KSKKQ +V++SSAEAEYRAL+ T E+ WL ++ + +P + CDN AA H A
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIA 532
Query: 128 DNLAFHERTKHIEIVCHLVRE 148
N FHERTKHIE CH VRE
Sbjct: 533 TNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 94.7 bits (234), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 56/85 (65%)
Query: 14 RVLRYLKGFICKGLLLYATSTLTISGYSDSDWVGCPSTRRSTTGYFTMLGFSPFSLKSKK 73
RVLRY+KG I GL ++ S L + + DSDW GC STRRSTTG+ T LG + S +K+
Sbjct: 141 RVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKR 200
Query: 74 QHIVARSSAEAEYRALATLTCELQW 98
Q V+RSS E EYRALA EL W
Sbjct: 201 QPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 59.7 bits (143), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 4 STDVHLTAAHRVLRYLKGFICKGLLLYATSTLTISGYSDSDWVGCPSTRRSTTGYFTML 62
S + A ++VL Y+KG + +GL ATS L + ++DSDW CP TRRS TG+ +++
Sbjct: 24 SRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFCSLV 82