BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3370.1
(1068 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 130 2e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 130 2e-30
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 104 1e-25
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 107 2e-25
AT1G34070.1 | Copia-like polyprotein/retrotransposon | Chr1:1240... 82 2e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 21/191 (10%)
Query: 897 SLYGLKQAPRAWFHRFASFLLTVGFTKSMNDHSMFVQAQGSSLIVLLLYVDDIILTGNSS 956
S+YGLKQA R WF +F+ L+ GF +S +DH+ F++ + + +L+YVDDII+ N+
Sbjct: 235 SIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNND 294
Query: 957 KNVEALFQTLSSEFAMNDLGDLHYFLGIEKA---------------DLVD------SKPS 995
V+ L L S F + DLG L YFLG+E A DL+D KPS
Sbjct: 295 AAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 996 ITPVASGNRISKSDGELLSDPSVYRSLVGGLQYLTMTWPDIAFSVNYSAQFMQSSRISHM 1055
P+ S G D YR L+G L YL +T DI+F+VN +QF ++ R++H
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414
Query: 1056 QLLKKTLRYVK 1066
Q + K L Y+K
Sbjct: 415 QAVMKILHYIK 425
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 798 SQVIS-EQVSNTVHPMRTRLRSATDPK----------WCTSMQDEFMALQKNETWSLVPP 846
SQ +S E+VS H + A +P WC +M DE A++ TW +
Sbjct: 61 SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 120
Query: 847 QPFMNILGNKWVFKIKHRSDGSIERYKARLVAKGFHQQDGLDFSETFSLV 896
P +G KWV+KIK+ SDG+IERYKARLVAKG+ QQ+G+DF ETFS V
Sbjct: 121 PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPV 170
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 21/191 (10%)
Query: 897 SLYGLKQAPRAWFHRFASFLLTVGFTKSMNDHSMFVQAQGSSLIVLLLYVDDIILTGNSS 956
S+YGLKQA R WF +F+ L+ GF +S +DH+ F++ + + +L+YVDDII+ N+
Sbjct: 235 SIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNND 294
Query: 957 KNVEALFQTLSSEFAMNDLGDLHYFLGIEKA---------------DLVD------SKPS 995
V+ L L S F + DLG L YFLG+E A DL+D KPS
Sbjct: 295 AAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 996 ITPVASGNRISKSDGELLSDPSVYRSLVGGLQYLTMTWPDIAFSVNYSAQFMQSSRISHM 1055
P+ S G D YR L+G L YL +T DI+F+VN +QF ++ R++H
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414
Query: 1056 QLLKKTLRYVK 1066
Q + K L Y+K
Sbjct: 415 QAVMKILHYIK 425
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 798 SQVIS-EQVSNTVHPMRTRLRSATDPK----------WCTSMQDEFMALQKNETWSLVPP 846
SQ +S E+VS H + A +P WC +M DE A++ TW +
Sbjct: 61 SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 120
Query: 847 QPFMNILGNKWVFKIKHRSDGSIERYKARLVAKGFHQQDGLDFSETFSLV 896
P +G KWV+KIK+ SDG+IERYKARLVAKG+ QQ+G+DF ETFS V
Sbjct: 121 PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPV 170
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 104 bits (260), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%)
Query: 821 DPKWCTSMQDEFMALQKNETWSLVPPQPFMNILGNKWVFKIKHRSDGSIERYKARLVAKG 880
DP WC +MQ+E AL +N+TW LVPP NILG KWVFK K SDG+++R KARLVAKG
Sbjct: 37 DPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96
Query: 881 FHQQDGLDFSETFSLV 896
FHQ++G+ F ET+S V
Sbjct: 97 FHQEEGIYFVETYSPV 112
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 107 bits (266), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 22/148 (14%)
Query: 940 IVLLLYVDDIILTGNSSKNVEALFQTLSSEFAMNDLGDLHYFLGIE-------------- 985
+ LLLYVDDI+LTG+S+ + L LSS F+M DLG +HYFLGI+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 986 -------KADLVDSKPSITPVASGNRISKSDGELLSDPSVYRSLVGGLQYLTMTWPDIAF 1038
A ++D KP TP+ S S + DPS +RS+VG LQYLT+T PDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1039 SVNYSAQFMQSSRISHMQLLKKTLRYVK 1066
+VN Q M ++ LLK+ LRYVK
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVK 147
>AT1G34070.1 | Copia-like polyprotein/retrotransposon |
Chr1:12402283-12403209 FORWARD LENGTH=308 | 201606
Length = 308
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 8 HPHLTSSISNVTYYISEKLD--ENNFLIWKDQIETILVSNDLFGYLDGSIQAPTKLITVD 65
+P +SN+ +I LD E+N+ W++ T +S D+ G++DG++ PT V+
Sbjct: 6 NPEQIYGVSNIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTL-LPTNANDVN 64
Query: 66 HDEMINPEYNSWKKFDSFVKSVLKSTFS-HSISSDVLGLTTSREIWQYLQRVYVEENETR 124
W+K D VK L T + + +TSR+IW ++ + + R
Sbjct: 65 -----------WQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDAR 113
Query: 125 ISTLREQIQHIKKGNSSICDYLRKIKTISDALIAANDKISDMELCRIVLKGLGKHYSQFI 184
L +++ G+ + DY RK+K ++D+L + ++D L VL GL + I
Sbjct: 114 ALRLDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNII 173
Query: 185 IAIHQRETAITFSDLRTRLIHHEEWLK 211
I R+ +F D T L E+ LK
Sbjct: 174 NVIKHRQPFPSFDDAATMLQEEEDRLK 200