BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3480.1
(326 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 239 6e-74
AT5G40405.2 | Tetratricopeptide repeat (TPR)-like superfamily pr... 238 1e-73
AT5G40405.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 238 1e-73
AT2G42920.2 | Pentatricopeptide repeat (PPR-like) superfamily pr... 235 8e-73
AT2G42920.1 | Pentatricopeptide repeat (PPR-like) superfamily pr... 235 8e-73
>AT5G66520.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:26551879-26553741 FORWARD LENGTH=620 |
201606
Length = 620
Score = 239 bits (611), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 176/274 (64%), Gaps = 1/274 (0%)
Query: 27 KQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGD-LDYAHHLFRHLPNPSTFIWNTMI 85
+++KQI + ++ +G + D YA K ++F S D L YA +F P TF+WN MI
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 86 RAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVLRACTDLTDGFTGSVAHSQIVRLGWE 145
R FS ++P ++ LY++ML N YTF +L+AC++L+ + H+QI +LG+E
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 146 TYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWTAMISGYVKIGQLEMAREMFDKM 205
+ N LI+ YA A LFD D +SW ++I GYVK G++++A +F KM
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 206 PERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKPNHAGIVGALTACGFLGALDQGK 265
E+N +SW+ +I+GYVQ + KEALQLF+EMQ + ++P++ + AL+AC LGAL+QGK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 266 WFHSYIDRNKIQLDRILGTALIDMYAKCGCIETA 299
W HSY+++ +I++D +LG LIDMYAKCG +E A
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Score = 97.4 bits (241), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 36/248 (14%)
Query: 61 GDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVL 120
G +D A LFR + + W TMI + + + +A L+ +M + P+N + + L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 121 RACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVI 180
AC L G HS ++ I M + C+
Sbjct: 255 SACAQLGALEQGKWIHS-----------YLNKTRIRMDSVLGCV---------------- 287
Query: 181 SWTAMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAG 240
+I Y K G++E A E+F + +++V +W+A+I+GY G +EA+ F EMQ G
Sbjct: 288 ----LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 241 IKPNHAGIVGALTACGFLGALDQGKWFHSYIDRN---KIQLDRILGTALIDMYAKCGCIE 297
IKPN LTAC + G +++GK ++R+ K ++ ++D+ + G ++
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY--GCIVDLLGRAGLLD 401
Query: 298 TARQQIME 305
A++ I E
Sbjct: 402 EAKRFIQE 409
>AT5G40405.2 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:16169315-16171153 FORWARD LENGTH=612 |
201606
Length = 612
Score = 238 bits (608), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 176/280 (62%), Gaps = 2/280 (0%)
Query: 24 LTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGDLDYAHHLFRHLPNPSTFIWNT 83
+T K+++QI + L + GTL D + G + A+SDH LDYA+ + P+ F N+
Sbjct: 17 ITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNS 76
Query: 84 MIRAFSERNQPIKAFCLYKQMLGFG--LLPNNYTFSFVLRACTDLTDGFTGSVAHSQIVR 141
MIRA + P K+F Y+++L G L P+NYT +F+++ACT L TG H +R
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 142 LGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWTAMISGYVKIGQLEMAREM 201
G++ VQ GLI +YA C+D K+F+ D + TAM++ + G + AR++
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 202 FDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKPNHAGIVGALTACGFLGAL 261
F+ MPER+ ++W+A+I+GY QVG +EAL +F+ MQL G+K N ++ L+AC LGAL
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 262 DQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETARQ 301
DQG+W HSYI+RNKI++ L T L+D+YAKCG +E A +
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Score = 92.4 bits (228), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 34/247 (13%)
Query: 55 SAISDHGDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNY 114
+A + GD+ +A LF +P WN MI +++ + +A ++ M G+ N
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 115 TFSFVLRACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDIS 174
VL ACT L G AHS I R + + L+ +YA C
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC------------- 288
Query: 175 SNRDVISWTAMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFN 234
G +E A E+F M E+NV +WS+ + G G ++ L+LF+
Sbjct: 289 ------------------GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 235 EMQLAGIKPNHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILG--TALIDMYAK 292
M+ G+ PN V L C +G +D+G+ + RN+ ++ L L+D+YA+
Sbjct: 331 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-RNEFGIEPQLEHYGCLVDLYAR 389
Query: 293 CGCIETA 299
G +E A
Sbjct: 390 AGRLEDA 396
>AT5G40405.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:16169315-16171153 FORWARD LENGTH=612 |
201606
Length = 612
Score = 238 bits (608), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 176/280 (62%), Gaps = 2/280 (0%)
Query: 24 LTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGDLDYAHHLFRHLPNPSTFIWNT 83
+T K+++QI + L + GTL D + G + A+SDH LDYA+ + P+ F N+
Sbjct: 17 ITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNS 76
Query: 84 MIRAFSERNQPIKAFCLYKQMLGFG--LLPNNYTFSFVLRACTDLTDGFTGSVAHSQIVR 141
MIRA + P K+F Y+++L G L P+NYT +F+++ACT L TG H +R
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 142 LGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWTAMISGYVKIGQLEMAREM 201
G++ VQ GLI +YA C+D K+F+ D + TAM++ + G + AR++
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 202 FDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKPNHAGIVGALTACGFLGAL 261
F+ MPER+ ++W+A+I+GY QVG +EAL +F+ MQL G+K N ++ L+AC LGAL
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 262 DQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETARQ 301
DQG+W HSYI+RNKI++ L T L+D+YAKCG +E A +
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Score = 92.4 bits (228), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 34/247 (13%)
Query: 55 SAISDHGDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNY 114
+A + GD+ +A LF +P WN MI +++ + +A ++ M G+ N
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 115 TFSFVLRACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDIS 174
VL ACT L G AHS I R + + L+ +YA C
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC------------- 288
Query: 175 SNRDVISWTAMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFN 234
G +E A E+F M E+NV +WS+ + G G ++ L+LF+
Sbjct: 289 ------------------GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 235 EMQLAGIKPNHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILG--TALIDMYAK 292
M+ G+ PN V L C +G +D+G+ + RN+ ++ L L+D+YA+
Sbjct: 331 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-RNEFGIEPQLEHYGCLVDLYAR 389
Query: 293 CGCIETA 299
G +E A
Sbjct: 390 AGRLEDA 396
>AT2G42920.2 | Pentatricopeptide repeat (PPR-like) superfamily
protein | Chr2:17858705-17860384 FORWARD LENGTH=559 |
201606
Length = 559
Score = 235 bits (599), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 184/314 (58%), Gaps = 6/314 (1%)
Query: 11 SNKRTLTYLDQPWLTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGDLDYAHHLF 70
S L +D TM+++KQI + LI +G ++D A +++AF S D++YA+ +F
Sbjct: 23 SGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASP-SDMNYAYLVF 81
Query: 71 RHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQML--GFGLLPNNYTFSFVLRACTDLTD 128
+ + + F+WNT+IR FS + P A ++ ML + P T+ V +A L
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 129 GFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWTAMISG 188
G H +++ G E F++N ++HMY C C+ A ++F DV++W +MI G
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 189 YVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKPNHAGI 248
+ K G ++ A+ +FD+MP+RN VSW+++I+G+V+ G FK+AL +F EMQ +KP+ +
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 249 VGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETARQQIMEGVK 308
V L AC +LGA +QG+W H YI RN+ +L+ I+ TALIDMY KCGCIE K
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 309 VQLSCLLRWEKMEL 322
QLSC W M L
Sbjct: 322 KQLSC---WNSMIL 332
Score = 89.0 bits (219), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 8/246 (3%)
Query: 61 GDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVL 120
G +D A +LF +P + WN+MI F + A ++++M + P+ +T +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 121 RACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVI 180
AC L G H IVR +E V LI MY C CI+ +F+ + + +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 181 SWTAMISGYVKIGQLEMAREMFDKMP----ERNVVSWSAIITGYVQVGLFKEALQLFNEM 236
W +MI G G E A ++F ++ E + VS+ ++T G A + F M
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 237 QLA-GIKPNHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGC 295
+ I+P+ + G G L++ + + I ++ D ++ ++L+ K G
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAE---ALIKNMPVEEDTVIWSSLLSACRKIGN 442
Query: 296 IETARQ 301
+E A++
Sbjct: 443 VEMAKR 448
>AT2G42920.1 | Pentatricopeptide repeat (PPR-like) superfamily
protein | Chr2:17858705-17860384 FORWARD LENGTH=559 |
201606
Length = 559
Score = 235 bits (599), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 184/314 (58%), Gaps = 6/314 (1%)
Query: 11 SNKRTLTYLDQPWLTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGDLDYAHHLF 70
S L +D TM+++KQI + LI +G ++D A +++AF S D++YA+ +F
Sbjct: 23 SGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASP-SDMNYAYLVF 81
Query: 71 RHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQML--GFGLLPNNYTFSFVLRACTDLTD 128
+ + + F+WNT+IR FS + P A ++ ML + P T+ V +A L
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 129 GFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWTAMISG 188
G H +++ G E F++N ++HMY C C+ A ++F DV++W +MI G
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 189 YVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKPNHAGI 248
+ K G ++ A+ +FD+MP+RN VSW+++I+G+V+ G FK+AL +F EMQ +KP+ +
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 249 VGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETARQQIMEGVK 308
V L AC +LGA +QG+W H YI RN+ +L+ I+ TALIDMY KCGCIE K
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 309 VQLSCLLRWEKMEL 322
QLSC W M L
Sbjct: 322 KQLSC---WNSMIL 332
Score = 89.0 bits (219), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 8/246 (3%)
Query: 61 GDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVL 120
G +D A +LF +P + WN+MI F + A ++++M + P+ +T +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 121 RACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVI 180
AC L G H IVR +E V LI MY C CI+ +F+ + + +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 181 SWTAMISGYVKIGQLEMAREMFDKMP----ERNVVSWSAIITGYVQVGLFKEALQLFNEM 236
W +MI G G E A ++F ++ E + VS+ ++T G A + F M
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 237 QLA-GIKPNHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGC 295
+ I+P+ + G G L++ + + I ++ D ++ ++L+ K G
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAE---ALIKNMPVEEDTVIWSSLLSACRKIGN 442
Query: 296 IETARQ 301
+E A++
Sbjct: 443 VEMAKR 448