BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3520.1
(272 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 175 1e-49
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 175 1e-49
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 117 2e-32
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 175 bits (444), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 4/180 (2%)
Query: 95 AYLSILNLPTEPTTYKEAAKHIEWTKATQEEYQTLLENKTWSLVPYNKTMNVLGCKWVFK 154
++L + EP+TY EA + + W A +E + TW + +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 155 LKQKSDGSIERYKARLVAKGFHQQEGIDYAETFSPVVKSNTIRIVLTIAVTRSWYIKQLD 214
+K SDG+IERYKARLVAKG+ QQEGID+ ETFSPV K +++++L I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 215 VSNAFLHGTLDEPVFMVQPSGFVQQGKESY----VCHLHKALYGLKQAPRAWFTKFATFL 270
+SNAFL+G LDE ++M P G+ + +S VC+L K++YGLKQA R WF KF+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 175 bits (444), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 4/180 (2%)
Query: 95 AYLSILNLPTEPTTYKEAAKHIEWTKATQEEYQTLLENKTWSLVPYNKTMNVLGCKWVFK 154
++L + EP+TY EA + + W A +E + TW + +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 155 LKQKSDGSIERYKARLVAKGFHQQEGIDYAETFSPVVKSNTIRIVLTIAVTRSWYIKQLD 214
+K SDG+IERYKARLVAKG+ QQEGID+ ETFSPV K +++++L I+ ++ + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 215 VSNAFLHGTLDEPVFMVQPSGFVQQGKESY----VCHLHKALYGLKQAPRAWFTKFATFL 270
+SNAFL+G LDE ++M P G+ + +S VC+L K++YGLKQA R WF KF+ L
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 117 bits (294), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 69/99 (69%)
Query: 105 EPTTYKEAAKHIEWTKATQEEYQTLLENKTWSLVPYNKTMNVLGCKWVFKLKQKSDGSIE 164
EP + A K W +A QEE L NKTW LVP N+LGCKWVFK K SDG+++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 165 RYKARLVAKGFHQQEGIDYAETFSPVVKSNTIRIVLTIA 203
R KARLVAKGFHQ+EGI + ET+SPVV++ TIR +L +A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125