BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3530.1
(332 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 172 6e-52
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 143 1e-37
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 143 1e-37
AT1G47497.2 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 9e-09
AT1G47497.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 9e-09
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 172 bits (435), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 136/232 (58%), Gaps = 41/232 (17%)
Query: 1 MVLLLYVDDIILTGSSVTQINGLINDLSAVFKMKDLGLLSYFLGIEVTYNHQQRYMMLTQ 60
M LLLYVDDI+LTGSS T +N LI LS+ F MKDLG + YFLGI++ + + L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 61 NKYALQILKKAELLDSKP--SKLPVSIGQRVSLTDGVELSNPTEYKSLVGALQYLTLTRP 118
KYA QIL A +LD KP + LP+ + VS + +P++++S+VGALQYLTLTRP
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS---TAKYPDPSDFRSIVGALQYLTLTRP 115
Query: 119 DHSFAVNI-------TQLSSCTSQQQVILY------------------------SDWAGC 147
D S+AVNI L+ ++V+ Y SDWAGC
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175
Query: 148 PDSRKSRGGYCVFLGSTLVSWCSKKQATVAKSSTEAEYKN---TTTEMVWVS 196
+R+S G+C FLG ++SW +K+Q TV++SSTE EY+ T E+ W S
Sbjct: 176 TSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 143 bits (360), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 130/236 (55%), Gaps = 36/236 (15%)
Query: 1 MVLLLYVDDIILTGSSVTQINGLINDLSAVFKMKDLGLLSYFLGIEVTYNHQQRYMMLTQ 60
+ +L+YVDDII+ ++ ++ L + L + FK++DLG L YFLG+E+ + + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQ 335
Query: 61 NKYALQILKKAELLDSKPSKLPVSIGQRVSLTDGVELSNPTEYKSLVGALQYLTLTRPDH 120
KYAL +L + LL KPS +P+ S G + + Y+ L+G L YL +TR D
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 121 SFAVN-ITQLS----------------------------SCTSQQQVILYSD--WAGCPD 149
SFAVN ++Q S S ++ Q+ ++SD + C D
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 150 SRKSRGGYCVFLGSTLVSWCSKKQATVAKSSTEAEYKN---TTTEMVWVSYLMEEL 202
+R+S GYC+FLG++L+SW SKKQ V+KSS EAEY+ T EM+W++ EL
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL 511
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 143 bits (360), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 130/236 (55%), Gaps = 36/236 (15%)
Query: 1 MVLLLYVDDIILTGSSVTQINGLINDLSAVFKMKDLGLLSYFLGIEVTYNHQQRYMMLTQ 60
+ +L+YVDDII+ ++ ++ L + L + FK++DLG L YFLG+E+ + + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQ 335
Query: 61 NKYALQILKKAELLDSKPSKLPVSIGQRVSLTDGVELSNPTEYKSLVGALQYLTLTRPDH 120
KYAL +L + LL KPS +P+ S G + + Y+ L+G L YL +TR D
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 121 SFAVN-ITQLS----------------------------SCTSQQQVILYSD--WAGCPD 149
SFAVN ++Q S S ++ Q+ ++SD + C D
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 150 SRKSRGGYCVFLGSTLVSWCSKKQATVAKSSTEAEYKN---TTTEMVWVSYLMEEL 202
+R+S GYC+FLG++L+SW SKKQ V+KSS EAEY+ T EM+W++ EL
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL 511
>AT1G47497.2 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:17431038-17431454 REVERSE
LENGTH=138 | 201606
Length = 138
Score = 53.9 bits (128), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 219 VVHNNESKFIEA-YATTTRSRNAEESEAIAILNGMIWAESHNHKQIIIESDNINIIQHLQ 277
V+ + +F+ A AT + NA ESE A+L M SH H++I E DN +++ L
Sbjct: 8 VIRDESGQFVGAGQATGNHTSNALESEFQALLIAMQSCWSHGHRKIWFEGDNREVMEILN 67
Query: 278 NQRNEIQ---WQSRIRIKKIQDIKRRLDKVKFSYTNRKFNQVADKLAK 322
+++ W I+ +Q K+R + +F++ NRK N+ AD LAK
Sbjct: 68 RRKSRFDTFNW-----IRDVQAWKQRFQECRFTWINRKQNKPADILAK 110
>AT1G47497.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:17431038-17431454 REVERSE
LENGTH=138 | 201606
Length = 138
Score = 53.9 bits (128), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 219 VVHNNESKFIEA-YATTTRSRNAEESEAIAILNGMIWAESHNHKQIIIESDNINIIQHLQ 277
V+ + +F+ A AT + NA ESE A+L M SH H++I E DN +++ L
Sbjct: 8 VIRDESGQFVGAGQATGNHTSNALESEFQALLIAMQSCWSHGHRKIWFEGDNREVMEILN 67
Query: 278 NQRNEIQ---WQSRIRIKKIQDIKRRLDKVKFSYTNRKFNQVADKLAK 322
+++ W I+ +Q K+R + +F++ NRK N+ AD LAK
Sbjct: 68 RRKSRFDTFNW-----IRDVQAWKQRFQECRFTWINRKQNKPADILAK 110