BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3610.1
(429 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 198 2e-55
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 198 2e-55
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 129 1e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 65 2e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 198 bits (503), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 29/241 (12%)
Query: 213 PSCFTQANKVPHWRNAMKEEYDALQRAGTWTLVPPHPSQNLVGCKWVFKIKQHEDGSIER 272
PS + +A + W AM +E A++ TW + P++ +GCKWV+KIK + DG+IER
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 273 YKARLVAKGFHQKEGVDFSETFSPVAKPTTIRV-------------------------LK 307
YKARLVAKG+ Q+EG+DF ETFSPV K T++++ L
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLD 205
Query: 308 EEVYMVQPSGFQ----DSLNPNYVCKLHKSLYGLKQAPRAWYEALMDALLGLGFTSSMSD 363
EE+YM P G+ DSL PN VC L KS+YGLKQA R W+ L+G GF S SD
Sbjct: 206 EEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD 265
Query: 364 SSLFISYVQGVITIVLIYVDDILVTGSSLTACKSLIDQLSKSFSMKDLGDLHYFLGLEVK 423
+ F+ + VL+YVDDI++ ++ A L QL F ++DLG L YFLGLE+
Sbjct: 266 HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA 325
Query: 424 R 424
R
Sbjct: 326 R 326
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 198 bits (503), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 29/241 (12%)
Query: 213 PSCFTQANKVPHWRNAMKEEYDALQRAGTWTLVPPHPSQNLVGCKWVFKIKQHEDGSIER 272
PS + +A + W AM +E A++ TW + P++ +GCKWV+KIK + DG+IER
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 273 YKARLVAKGFHQKEGVDFSETFSPVAKPTTIRV-------------------------LK 307
YKARLVAKG+ Q+EG+DF ETFSPV K T++++ L
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLD 205
Query: 308 EEVYMVQPSGFQ----DSLNPNYVCKLHKSLYGLKQAPRAWYEALMDALLGLGFTSSMSD 363
EE+YM P G+ DSL PN VC L KS+YGLKQA R W+ L+G GF S SD
Sbjct: 206 EEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD 265
Query: 364 SSLFISYVQGVITIVLIYVDDILVTGSSLTACKSLIDQLSKSFSMKDLGDLHYFLGLEVK 423
+ F+ + VL+YVDDI++ ++ A L QL F ++DLG L YFLGLE+
Sbjct: 266 HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA 325
Query: 424 R 424
R
Sbjct: 326 R 326
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 129 bits (325), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 98/161 (60%), Gaps = 12/161 (7%)
Query: 179 MITRSKVGIYKPRVLQATKYPIPQALLASSIPDTPSCFTQANKVPHWRNAMKEEYDALQR 238
M+TRSK GI K KY + + ++I P A K P W AM+EE DAL R
Sbjct: 1 MLTRSKAGINKLN----PKYSLT---ITTTIKKEPKSVIFALKDPGWCQAMQEELDALSR 53
Query: 239 AGTWTLVPPHPSQNLVGCKWVFKIKQHEDGSIERYKARLVAKGFHQKEGVDFSETFSPVA 298
TW LVPP +QN++GCKWVFK K H DG+++R KARLVAKGFHQ+EG+ F ET+SPV
Sbjct: 54 NKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVV 113
Query: 299 KPTTIRVLKEEVYMVQPSGFQDSLNPNYVCKLHKSLYGLKQ 339
+ TIR + + + Q S+ N++ K+H S+ K+
Sbjct: 114 RTATIRTI---LNVAQQLEVGQSI--NWMFKMHFSMGIFKK 149
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 378 VLIYVDDILVTGSSLTACKSLIDQLSKSFSMKDLGDLHYFLGLEVK 423
+L+YVDDIL+TGSS T LI QLS +FSMKDLG +HYFLG+++K
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK 48