BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3630.1
(244 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 234 4e-73
AT5G48910.1 | Pentatricopeptide repeat (PPR) superfamily protein... 234 8e-73
AT4G37380.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 231 1e-71
AT5G59200.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 224 4e-70
AT1G50270.1 | Pentatricopeptide repeat (PPR) superfamily protein... 224 1e-69
>AT5G66520.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:26551879-26553741 FORWARD LENGTH=620 |
201606
Length = 620
Score = 234 bits (596), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 164/242 (67%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MYAKCG +E A +VF + ++ V A+T++ISG A HG + AI F++M + G+ PN +T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
F VL+ACS GLVEEG F SM Y ++P+IEHYGC+VDLLGRAG+LDEAK+ + EM
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
++P++ + GALL ACR+H ++ELG+E+ E L HGG +V +N++A +W+ A
Sbjct: 411 PLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAA 470
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLKSSRFDE 240
+ R+ M+++ V KVPGCS I ++ EF+AGDRSH ++ I S ++ +L+ + +
Sbjct: 471 ETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVP 530
Query: 241 EF 242
E
Sbjct: 531 EL 532
Score = 68.6 bits (166), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 37/180 (20%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
Y K G ++ A +F +M+E++ ++T+MISG +K A++LF +M V P+ V+
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGC-MVDLLGRAGMLDEA------- 113
LSAC+++G +E+G +N+ S+ GC ++D+ + G ++EA
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 114 -KKLVSEMT--------------------------MEPDSYVLGALLNACRMHGDVELGK 146
KK V T ++P+ A+L AC G VE GK
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 20 ERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTFICVLSACSRMGLVEEGMR 79
E DV+A S+I+ A G K A LF ++ E P++V++ V+ + G ++ +
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALT 202
Query: 80 FFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMT---MEPDSYVLGALLNAC 136
F+ M E I + M+ +A M EA +L EM +EPD+ L L+AC
Sbjct: 203 LFRKMAEKNAIS-----WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 137 RMHGDVELGKEMVERLAGRSLNHGGV-HVLLSNMYASANRWEDVAKVRKKMEDKNVK 192
G +E GK + L + V +L +MYA E+ +V K ++ K+V+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
>AT5G48910.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr5:19832969-19834909 REVERSE LENGTH=646 | 201606
Length = 646
Score = 234 bits (596), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 163/234 (69%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MY+KCG IE A VF + +V +++MI+G A HG++ AI+ F KM + GV P++V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
+I +L+ACS GLVEEG R+F M V G+EP IEHYGCMVDLLGR+G+LDEA++ + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
++PD + ALL ACRM G+VE+GK + L + G +V LSNMYAS W +V+
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLK 234
++R +M++K+++K PGCSLI++D V+ EFV D SH +I S+L+ I+++L+
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Score = 69.3 bits (168), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
Y + G + AR +F++M +R V ++ +MISG + +G K A+E+F +M + + PN VT
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMT 121
+ VL A SR+G +E G + E GI ++D+ + G++++A + +
Sbjct: 278 VSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336
Query: 122 MEPDSYVLGALLNACRMHG 140
E + A++N +HG
Sbjct: 337 RE-NVITWSAMINGFAIHG 354
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 8 IETARQVFNEMSERDVFAFTSMISGLANHGRSKS--AIELFIKMGEDG-VNPNEVTFICV 64
++ A ++FN+M +R+ F++ ++I G + K+ AI LF +M D V PN TF V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 65 LSACSRMGLVEEG 77
L AC++ G ++EG
Sbjct: 135 LKACAKTGKIQEG 147
>AT4G37380.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:17572040-17573938 REVERSE LENGTH=632 |
201606
Length = 632
Score = 231 bits (588), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 161/239 (67%), Gaps = 1/239 (0%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKM-GEDGVNPNEV 59
MY+KCG +E A VFN+ +D+ A+ +MI+G A HG S+ A+ LF +M G G+ P ++
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 60 TFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSE 119
TFI L AC+ GLV EG+R F+SM + YGI+P IEHYGC+V LLGRAG L A + +
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 120 MTMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDV 179
M M+ DS + ++L +C++HGD LGKE+ E L G ++ + G++VLLSN+YAS +E V
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGV 482
Query: 180 AKVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLKSSRF 238
AKVR M++K + K PG S IE++ V EF AGDR H +I ++L I+ ++KS +
Sbjct: 483 AKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGY 541
Score = 79.3 bits (194), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDG-VNPNEVT 60
YAK G +E AR +F+ M ERD+ ++ MI G A HG A+ LF K+ +G P+E+T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
+ LSACS++G +E G R+ + I +++ ++D+ + G L+EA LV
Sbjct: 262 VVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA-VLVFND 319
Query: 121 TMEPDSYVLGALLNACRMHG 140
T D A++ MHG
Sbjct: 320 TPRKDIVAWNAMIAGYAMHG 339
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
YA G I + +F++ + D+F FT+ I+ + +G A L++++ +NPNE TF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 62 ICVLSACSRMG--LVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSE 119
+L +CS L+ + F GI+P + +VD+ + G + A+K+
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFG-----LGIDPYVA--TGLVDVYAKGGDVVSAQKVFDR 186
Query: 120 MTMEPDSYVLG--ALLNACRMHGDVELGKEMVERLAGRSL 157
M P+ ++ A++ G+VE + + + + R +
Sbjct: 187 M---PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
>AT5G59200.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:23888793-23890427 REVERSE LENGTH=544 |
201606
Length = 544
Score = 224 bits (572), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 158/240 (65%), Gaps = 3/240 (1%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MY++CG I AR+VF M ++DV ++ +MISGLA HG S AI F M G PN+VT
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
+ +L+ACS GL++ G+ F SM V+ +EP IEHYGC+VDLLGR G L+EA + + +
Sbjct: 359 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
+EPD +LG LL+AC++HG++ELG+++ +RL G +VLLSN+YAS+ +W++
Sbjct: 419 PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKEST 478
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLKSSRFDE 240
++R+ M D ++K PGCS IEVD + EF+ GD +H + I L +N L RF E
Sbjct: 479 EIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRIL---RFKE 535
Score = 75.1 bits (183), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
Y++CG I+ A ++F ++ +D +T+MI GL + A+ELF +M + V+ NE T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMT 121
+CVLSACS +G +E G R+ S E +E S ++++ R G ++EA+++ M
Sbjct: 259 VCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 122 MEPDSYVLGALLNACRMHG 140
+ D +++ MHG
Sbjct: 318 -DKDVISYNTMISGLAMHG 335
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 8 IETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTFICVLSA 67
++ A VF+ +S +V+ +T+MI G + GRS + L+ +M + V P+ VL A
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 68 CSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMTMEPD 125
C E + K G S M+++ G++G L AKK+ EM PD
Sbjct: 137 CDLKVCREIHAQVLK-----LGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEM---PD 186
>AT1G50270.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr1:18622044-18623834 FORWARD LENGTH=596 | 201606
Length = 596
Score = 224 bits (572), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 151/235 (64%), Gaps = 1/235 (0%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
+Y KCGC+E A VF + E++V+ +T+MI+G A HG ++ A +LF M V+PNEVT
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
F+ VLSAC+ GLVEEG R F SM + +EP +HY CMVDL GR G+L+EAK L+ M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
MEP + V GAL +C +H D ELGK R+ +H G + LL+N+Y+ + W++VA
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVA 529
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDL-MDDIVSVLLLINNQLK 234
+VRK+M+D+ V K PG S IEV + EF+A D L DD+ L + Q++
Sbjct: 530 RVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 75.5 bits (184), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MY KC C + A++VF+EM R+V +T++I+G + +F +M + V PNE T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIE----HYGCMVDLLGRAGMLDEAKKL 116
VLSAC+ +G + G R Y I+ SIE ++DL + G L+EA L
Sbjct: 309 LSSVLSACAHVGALHRGRRV-----HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA-IL 362
Query: 117 VSEMTMEPDSYVLGALLNACRMHG 140
V E E + Y A++N HG
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHG 386
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
Y+ G + A ++F+ ++DV +T+MI G +G + A+ F++M + GV NE+T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVY----GIEPSIEHYGCMVDLLGRAGMLDEAKKLV 117
+ VL A ++ E +RF +S++ +Y ++ + +VD+ G+ D+A+K+
Sbjct: 208 VSVLKAAGKV----EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVF 263
Query: 118 SEM 120
EM
Sbjct: 264 DEM 266