BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3660.1
(129 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08070.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 98 1e-24
AT1G08070.2 | Tetratricopeptide repeat (TPR)-like superfamily pr... 97 2e-24
AT4G33990.2 | Tetratricopeptide repeat (TPR)-like superfamily pr... 94 3e-23
AT4G33990.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 94 3e-23
AT2G29760.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 94 4e-23
>AT1G08070.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr1:2514374-2516599 REVERSE LENGTH=741 |
201606
Length = 741
Score = 97.8 bits (242), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 65/96 (67%)
Query: 13 ALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWEDVAKVRKKMENKI 72
+L AC+MHG+VELG+ E L ++ G +VLLSN+YASA RW +VAK R + +K
Sbjct: 543 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKG 602
Query: 73 VKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVL 108
+KKVPGCS IE+D VV EF+ GD+ H +I +L
Sbjct: 603 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
>AT1G08070.2 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr1:2514374-2516287 REVERSE LENGTH=637 |
201606
Length = 637
Score = 97.4 bits (241), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 65/96 (67%)
Query: 13 ALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWEDVAKVRKKMENKI 72
+L AC+MHG+VELG+ E L ++ G +VLLSN+YASA RW +VAK R + +K
Sbjct: 439 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKG 498
Query: 73 VKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVL 108
+KKVPGCS IE+D VV EF+ GD+ H +I +L
Sbjct: 499 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 534
>AT4G33990.2 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:16290141-16292679 REVERSE LENGTH=816 |
201606
Length = 816
Score = 94.4 bits (233), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 1 MSKEPDSYELLGALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWED 60
MS +PD+ + GAL +ACR+HG+V+LGK E L +H G HVLLSNMYASA +WE
Sbjct: 607 MSLQPDA-SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 665
Query: 61 VAKVRKKMENKIVKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVLLLINNQLK 116
V ++R K ++K PG S +EVD V F G+++H + +++ L + +LK
Sbjct: 666 VDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 721
>AT4G33990.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:16290141-16292612 REVERSE LENGTH=823 |
201606
Length = 823
Score = 94.4 bits (233), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 1 MSKEPDSYELLGALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWED 60
MS +PD+ + GAL +ACR+HG+V+LGK E L +H G HVLLSNMYASA +WE
Sbjct: 614 MSLQPDA-SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 61 VAKVRKKMENKIVKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVLLLINNQLK 116
V ++R K ++K PG S +EVD V F G+++H + +++ L + +LK
Sbjct: 673 VDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
>AT2G29760.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr2:12712884-12715100 FORWARD LENGTH=738 |
201606
Length = 738
Score = 93.6 bits (231), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%)
Query: 5 PDSYELLGALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWEDVAKV 64
P S + GAL AC++H ++ L + RL + G HVLLSN+YA +WE+V+++
Sbjct: 531 PPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590
Query: 65 RKKMENKIVKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVLLLINNQLKSSKFDEEI 124
RK M +KK PGCS IE+D ++ EF++GD +H + + + L + +LKS+ ++ EI
Sbjct: 591 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEI 650