BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g3680.1
         (359 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G29785.1 | Pol-like polyprotein/retrotransposon | Chr3:116123...    50   1e-07
AT4G00980.1 | zinc knuckle (CCHC-type) family protein | Chr4:422...    46   4e-05

>AT3G29785.1 | Pol-like polyprotein/retrotransposon |
          Chr3:11612357-11612686 REVERSE LENGTH=109 | 201606
          Length = 109

 Score = 50.4 bits (119), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 9  RLNAANYHVWKGKMEDLLFVKEFHAPVFYVKKPDEKTDDQWTLLNRQVCGLIRQWVDDNV 68
          +++  +Y   + K+ED L+ K+ H P+   KK +  + D W +L RQV  +IR  +  N+
Sbjct: 8  KVDGTSYSFCRMKIEDYLYGKKLHQPLG--KKVETMSQDDWNILYRQVLDVIRLTISKNI 65

Query: 69 LHHIENETNARSLWLKLEQLFARKTGNN 96
           H++  E +   L   L  ++ + + NN
Sbjct: 66 AHNVAKEKSPDGLMKVLSDIYKKPSTNN 93


>AT4G00980.1 | zinc knuckle (CCHC-type) family protein |
           Chr4:422732-424580 REVERSE LENGTH=488 | 201606
          Length = 488

 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 38/265 (14%)

Query: 6   RMIRLNAANYHVWKGKMEDLLFVKEFHAPVFYVKKPDEKTDDQWTLLN-RQVC---GLIR 61
           ++ R +  +Y  W  +ME  LF+K+        +        Q    N R++       +
Sbjct: 194 KISRFDGKSYLYWASQME--LFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGK 251

Query: 62  QWVDDNVL--HHIENE-------------TNARSLWLKLEQLFARKTGNNKMYMMKKLLE 106
           +W+ D+ L   H+ N               +A+ LW +L+ ++      +K   ++K +E
Sbjct: 252 KWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIE 311

Query: 107 LRYREGTPMTDHLNVFQGLLNKLSDMGINFDEEIRGLWLLGTLPDSWEVFRSLCNS--TS 164
            R  E  P+ + + VF  + + +   G+  DE      ++   P SW   R  C      
Sbjct: 312 FRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSW---RGFCTRLMEE 368

Query: 165 EGVISRDLVKNSILNEEAMRQS------NLSSSSSDVLVTESRGRSSHRES-----KKNR 213
           E +    L++     EE +R          ++ SS +  T S G ++HR S     K+  
Sbjct: 369 EYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLG-TTHRGSQSVGWKRKE 427

Query: 214 SKSNKFANVECHYFHKRWHLKKNCW 238
            + ++   + C    ++ HL K+CW
Sbjct: 428 PERDERVIIVCDNCGRKGHLAKHCW 452

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