BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g3690.1
         (396 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    72   1e-14

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 71.6 bits (174), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 61  GKWKLSRGSMVVARGDKFSSFYWMKAKVSMDAVNAVEN-DDAMKLWHKRLGHISEKGLSV 119
           G  K+ +G   + +G++  S Y ++  V     N  E   D  +LWH RL H+S++G+ +
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMEL 86

Query: 120 LSKRDAITGISGLQLQKCEHCFAGKQHRVSFKSSGSSRKPGILDLVHSDVCG 171
           L K+  +       L+ CE C  GK HRV+F S+G       LD VHSD+ G
Sbjct: 87  LVKKGFLDSSKVSSLKFCEDCIYGKTHRVNF-STGQHTTKNPLDYVHSDLWG 137

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