BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3700.1
(141 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 102 9e-26
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 102 9e-26
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 72 2e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 102 bits (253), Expect = 9e-26, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 70/101 (69%)
Query: 1 MRDEMDSLEENHTFELVKLPQGKRALLNRWVYRVKHEETMLLPRYKARLVVKGFNQRKGI 60
M DE+ ++E HT+E+ LP K+ + +WVY++K+ + RYKARLV KG+ Q++GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DFDEIFSPVVKMSSIRVAVGLAASLDLEVEQMDVKTAFLHG 101
DF E FSPV K++S+++ + ++A + + Q+D+ AFL+G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 102 bits (253), Expect = 9e-26, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 70/101 (69%)
Query: 1 MRDEMDSLEENHTFELVKLPQGKRALLNRWVYRVKHEETMLLPRYKARLVVKGFNQRKGI 60
M DE+ ++E HT+E+ LP K+ + +WVY++K+ + RYKARLV KG+ Q++GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DFDEIFSPVVKMSSIRVAVGLAASLDLEVEQMDVKTAFLHG 101
DF E FSPV K++S+++ + ++A + + Q+D+ AFL+G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 72.0 bits (175), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 1 MRDEMDSLEENHTFELVKLPQGKRALLNRWVYRVKHEETMLLPRYKARLVVKGFNQRKGI 60
M++E+D+L N T+ LV P + L +WV++ K L R KARLV KGF+Q +GI
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DFDEIFSPVVKMSSIRVAVGLAASLDL 87
F E +SPVV+ ++IR + +A L++
Sbjct: 104 YFVETYSPVVRTATIRTILNVAQQLEV 130