BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3710.1
(321 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 72 2e-14
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 67 9e-12
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 67 9e-12
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 72.0 bits (175), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 26 IILLLYVDDMLIVGRNSRRILELKKQLSKFFAMKDLGPAKQILGIRIVRDRENRLIHLSQ 85
+ LLLYVDD+L+ G ++ + L QLS F+MKDLGP LGI+I + LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 86 EKYIEKILQRFCMDKSKAVSTSLAGHFRLSSQHSPSTDSELEAMERVPYASAVGSLMYAM 145
KY E+IL M K +ST L +L+S S + + + + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTA-----KYPDPSDFRSIVGALQY-L 110
Query: 146 VYTRPDIAHA 155
TRPDI++A
Sbjct: 111 TLTRPDISYA 120
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 5 GYNKTTSDHCVFVQRFGEGDFIILLLYVDDMLIVGRNSRRILELKKQLSKFFAMKDLGPA 64
G+ ++ SDH F+ + F+ +L+YVDD++I N + ELK QL F ++DLGP
Sbjct: 258 GFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316
Query: 65 KQILGIRIVRDRENRLIHLSQEKYIEKILQRFCMDKSKAVSTSLAGHFRLSSQHSPSTDS 124
K LG+ I R I++ Q KY +L + K S + S+ HS
Sbjct: 317 KYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA-HSGGDFV 373
Query: 125 ELEAMERVPYASAVGSLMYAMVYTRPDIAHA 155
+ +A R+ +G LMY + TR DI+ A
Sbjct: 374 DAKAYRRL-----IGRLMYLQI-TRLDISFA 398
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 5 GYNKTTSDHCVFVQRFGEGDFIILLLYVDDMLIVGRNSRRILELKKQLSKFFAMKDLGPA 64
G+ ++ SDH F+ + F+ +L+YVDD++I N + ELK QL F ++DLGP
Sbjct: 258 GFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316
Query: 65 KQILGIRIVRDRENRLIHLSQEKYIEKILQRFCMDKSKAVSTSLAGHFRLSSQHSPSTDS 124
K LG+ I R I++ Q KY +L + K S + S+ HS
Sbjct: 317 KYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA-HSGGDFV 373
Query: 125 ELEAMERVPYASAVGSLMYAMVYTRPDIAHA 155
+ +A R+ +G LMY + TR DI+ A
Sbjct: 374 DAKAYRRL-----IGRLMYLQI-TRLDISFA 398