BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3720.1
(196 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40405.2 | Tetratricopeptide repeat (TPR)-like superfamily pr... 174 2e-51
AT5G40405.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 174 2e-51
AT5G66520.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 172 1e-50
AT3G62890.1 | Pentatricopeptide repeat (PPR) superfamily protein... 171 2e-50
AT5G43790.1 | Pentatricopeptide repeat (PPR) superfamily protein... 169 2e-50
>AT5G40405.2 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:16169315-16171153 FORWARD LENGTH=612 |
201606
Length = 612
Score = 174 bits (442), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
Query: 22 GSKRESKTLLKVMPGNRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKL 81
G RE+ + +M +L G+K N ++ L+AC LGALDQG+W HSY++RNKIK+
Sbjct: 219 GESREALNVFHLM-----QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI 273
Query: 82 DRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMG 141
L T L+D+YAKC +E A +VF M E++V+ ++S ++GLA +G + +ELF M
Sbjct: 274 TVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK 333
Query: 142 EDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDL 194
+DGV+PN VTF+ VL CS +G V+EG R F SM +GIEP++EHYGC+VDL
Sbjct: 334 QDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Score = 69.3 bits (168), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 44 IKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKCCCIETAS 103
+KP++ + + AC L + G +H R D + T LI +YA+ C+++
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 104 QVFNE-------------------------------MSERDVFAFTSMISGLANHGRSKS 132
+VFN M ERD A+ +MISG A G S+
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 133 AIELFIKMGEDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMV 192
A+ +F M +GV N V I VLSAC+++G +++G R+ S E I+ + +V
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLV 282
Query: 193 DL 194
DL
Sbjct: 283 DL 284
>AT5G40405.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:16169315-16171153 FORWARD LENGTH=612 |
201606
Length = 612
Score = 174 bits (442), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
Query: 22 GSKRESKTLLKVMPGNRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKL 81
G RE+ + +M +L G+K N ++ L+AC LGALDQG+W HSY++RNKIK+
Sbjct: 219 GESREALNVFHLM-----QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI 273
Query: 82 DRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMG 141
L T L+D+YAKC +E A +VF M E++V+ ++S ++GLA +G + +ELF M
Sbjct: 274 TVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK 333
Query: 142 EDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDL 194
+DGV+PN VTF+ VL CS +G V+EG R F SM +GIEP++EHYGC+VDL
Sbjct: 334 QDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Score = 69.3 bits (168), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 44 IKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKCCCIETAS 103
+KP++ + + AC L + G +H R D + T LI +YA+ C+++
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 104 QVFNE-------------------------------MSERDVFAFTSMISGLANHGRSKS 132
+VFN M ERD A+ +MISG A G S+
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 133 AIELFIKMGEDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMV 192
A+ +F M +GV N V I VLSAC+++G +++G R+ S E I+ + +V
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLV 282
Query: 193 DL 194
DL
Sbjct: 283 DL 284
>AT5G66520.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr5:26551879-26553741 FORWARD LENGTH=620 |
201606
Length = 620
Score = 172 bits (437), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 111/155 (71%)
Query: 42 AGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKCCCIET 101
+ ++P++ + AL+AC LGAL+QGKWIHSY+++ +I++D +LG LIDMYAKC +E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 102 ASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVSPNEVTFICVLSACSR 161
A +VF + ++ V A+T++ISG A HG + AI F++M + G+ PN +TF VL+ACS
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360
Query: 162 MGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDLLG 196
GLVEEG F SM Y ++P IEHYGC+VDLLG
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Score = 60.8 bits (146), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%)
Query: 82 DRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMG 141
D + ++I Y K ++ A +F +M+E++ ++T+MISG +K A++LF +M
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 142 EDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEV 178
V P+ V+ LSAC+++G +E+G +N+
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT 276
>AT3G62890.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr3:23246168-23247973 FORWARD LENGTH=573 | 201606
Length = 573
Score = 171 bits (434), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 120/177 (67%), Gaps = 2/177 (1%)
Query: 22 GSKRESKTLLKVMPGNRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKL 81
G +E+ L + M +P A ++PN + L+ACG LGAL+QGKW+H+Y+D+ +++
Sbjct: 173 GKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEI 232
Query: 82 DRILGTALIDMYAKCCCIETASQVFNEM-SERDVFAFTSMISGLANHGRSKSAIELFIKM 140
D +LGTALIDMYAKC +E A +VFN + S++DV A+++MI LA +G + +LF +M
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Query: 141 -GEDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDLLG 196
D ++PN VTF+ +L AC GL+ EG +FK M E +GI P I+HYGCMVDL G
Sbjct: 293 TTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Score = 67.0 bits (162), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 87 TALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKM-----G 141
++++ YAK I+ A ++F+EM ER+V +++ +I+G G+ K A++LF +M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 142 EDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDL 194
E V PNE T VLSAC R+G +E+G ++ + + Y +E I ++D+
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDM 243
>AT5G43790.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr5:17592099-17593481 REVERSE LENGTH=460 | 201606
Length = 460
Score = 169 bits (428), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 106/153 (69%)
Query: 44 IKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKCCCIETAS 103
++PN +V + +C LG +G W H YV +N + L++ +GT+LID+Y+KC C+ A
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 104 QVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVSPNEVTFICVLSACSRMG 163
+VF+EMS+RDV + +MI GLA HG + IEL+ + G+ P+ TF+ +SACS G
Sbjct: 272 KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSG 331
Query: 164 LVEEGMRFFKSMNEVYGIEPRIEHYGCMVDLLG 196
LV+EG++ F SM VYGIEP++EHYGC+VDLLG
Sbjct: 332 LVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG 364
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 44 IKPNHAGIVGALTACGFLGALDQ-GKWIHSYVDR--NKIKLDRILGTALIDMYAKCCCIE 100
++PN A GF + G+ +H++V + + DR + AL+ YA C +
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 101 TASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVSPNEVTFICVLSACS 160
A +F + E D+ + ++++ AN S E+ + V PNE++ + ++ +C+
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 161 RMG 163
+G
Sbjct: 228 NLG 230