BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3790.1
(206 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43790.1 | Pentatricopeptide repeat (PPR) superfamily protein... 167 2e-49
AT2G13600.1 | Pentatricopeptide repeat (PPR) superfamily protein... 170 4e-49
AT5G04780.1 | Pentatricopeptide repeat (PPR) superfamily protein... 167 2e-48
AT1G50270.1 | Pentatricopeptide repeat (PPR) superfamily protein... 166 3e-48
AT2G03880.1 | Pentatricopeptide repeat (PPR) superfamily protein... 165 1e-47
>AT5G43790.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr5:17592099-17593481 REVERSE LENGTH=460 | 201606
Length = 460
Score = 167 bits (422), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 16/204 (7%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
+Y+KCGC+ A +VF+EMS+RDV + +MI GLA HG + IEL+ + G P+
Sbjct: 260 LYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD--- 316
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
S + + +SACS GLV+EG++ F SM VYGIE + HYGC+VDLL
Sbjct: 317 -------------SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLL 363
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVHV 180
GR+ L+EA++ + +M ++P++ + + L + HGD E G ++ L G ++ G +V
Sbjct: 364 GRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYV 423
Query: 181 LLSNMYASANQWEDVVKVRKKMED 204
LLSN+YA N+W DV K R+ M+D
Sbjct: 424 LLSNIYAGVNRWTDVEKTRELMKD 447
>AT2G13600.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr2:5671493-5673586 FORWARD LENGTH=697 | 201606
Length = 697
Score = 170 bits (430), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 118/202 (58%), Gaps = 16/202 (7%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
MY KCGC+E VF +M ERD ++ +MI G A +G +ELF +M E G P+
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD--- 492
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
HI+ VLSAC G VEEG +F SM +G+ HY CMVDLL
Sbjct: 493 -----------HITMIG--VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVHV 180
GRA L+EAK ++ EM M+PDS + G+LL AC +H ++ LG+ + E+L + G +V
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 181 LLSNMYASANQWEDVVKVRKKM 202
LLSNMYA +WEDV+ VRK M
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSM 621
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
MY+KCG + A +VF+EM +R+V ++ S+I+ +G + +++F M E P+E+
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
L V+SAC+ + ++ G + + + I VD+
Sbjct: 256 LAS----------------VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDS 175
+ S + EA+ + M + + ++++ M + R M ++A R++ S
Sbjct: 300 AKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 74/245 (30%)
Query: 2 YAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGE-DGGNPNELL 60
Y+KCG +E QVF++M +R+++ + S+++GL G LF M E D N ++
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 61 LKPKYFVNFGR-----------HISTF------YSLVLSACSRMGLVEEGMRFF----KS 99
F R H F ++ VLSACS + + +G++ KS
Sbjct: 125 ---SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 100 --MNEVYGIEQSIGHYGCMVDLLGRASMLDEAKKLVSEMS-------------------- 137
+++VY IG +VD+ + +++A+++ EM
Sbjct: 182 PFLSDVY-----IG--SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 138 --------------MEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVH--VL 181
+EPD L ++++AC +++G+E + GR + +D + ++
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE----VHGRVVKNDKLRNDII 290
Query: 182 LSNMY 186
LSN +
Sbjct: 291 LSNAF 295
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 2 YAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPN---- 57
YA + A +F +M+ER+V ++ ++I+G +G ++ + LF + + P
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 389
Query: 58 -----------ELLLKPKYFVNFGRHISTFYS----------LVLSACSRMGLVEEGMRF 96
EL L + V+ +H F S ++ + G VEEG
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 97 FKSMNEVYGIEQSIGHYGCMVDLLGRASMLDEAKKLVSEM---SMEPDSYVLGALLNACG 153
F+ M +E+ + M+ + +EA +L EM +PD + +L+ACG
Sbjct: 450 FRKM-----MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 154 MHGDVELGR 162
G VE GR
Sbjct: 505 HAGFVEEGR 513
>AT5G04780.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr5:1384540-1386447 FORWARD LENGTH=635 | 201606
Length = 635
Score = 167 bits (423), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 125/204 (61%), Gaps = 16/204 (7%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
MYAKCG + + +F+E+ E+++ + ++ISG A H R K V+ LF KM +DG +PNE+
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV- 365
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
TF SL LS C GLVEEG RFFK M YG+ ++ HY CMVD+L
Sbjct: 366 --------------TFSSL-LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVHV 180
GRA +L EA +L+ + +P + + G+LL +C ++ ++EL E+L ++ G HV
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHV 470
Query: 181 LLSNMYASANQWEDVVKVRKKMED 204
LLSN+YA+ QWE++ K RK + D
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRD 494
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 33/188 (17%)
Query: 2 YAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNEL-- 59
Y+KCG +E A QVF+ M ER + ++ +MI + +++F++M +G +E
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 60 --------------------LLKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKS 99
L K ++ ++ T +L ++ G++++ ++ F+S
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGT---ALLDLYAKCGMIKDAVQVFES 222
Query: 100 MNEVYGIEQSIGHYGCMVDLLGRASMLDEAKKL---VSEMSMEPDSYVLGALLNACGMHG 156
M ++S + MV + +EA L MS+E + + L +++ AC
Sbjct: 223 MQ-----DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 157 DVELGREM 164
+ G++M
Sbjct: 278 ALIEGKQM 285
>AT1G50270.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr1:18622044-18623834 FORWARD LENGTH=596 | 201606
Length = 596
Score = 166 bits (421), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 16/205 (7%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
+Y KCGC+E A VF + E++V+ +T+MI+G A HG ++ +LF M +PNE+
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEV- 408
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
TF + VLSAC+ GLVEEG R F SM + +E HY CMVDL
Sbjct: 409 --------------TFMA-VLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLF 453
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVHV 180
GR +L+EAK L+ M MEP + V GAL +C +H D ELG+ R+ G +
Sbjct: 454 GRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYT 513
Query: 181 LLSNMYASANQWEDVVKVRKKMEDK 205
LL+N+Y+ + W++V +VRK+M+D+
Sbjct: 514 LLANLYSESQNWDEVARVRKQMKDQ 538
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
MY KC C + A +VF+EM R+V +T++I+G + + +F +M + PNE
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
L S VLSAC+ +G + G R M + IE + ++DL
Sbjct: 309 L----------------SSVLSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLY 351
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHG 156
+ L+EA LV E E + Y A++N HG
Sbjct: 352 VKCGCLEEA-ILVFERLHEKNVYTWTAMINGFAAHG 386
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 65/246 (26%)
Query: 2 YAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELLL 61
Y+ G + AS++F+ ++DV +T+MI G +G + + F++M + G NE+
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEM-- 205
Query: 62 KPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGC------ 115
V+S G VE+ +RF +S V+G+ G C
Sbjct: 206 -----------------TVVSVLKAAGKVED-VRFGRS---VHGLYLETGRVKCDVFIGS 244
Query: 116 -MVDLLGRASMLDEAKKLVSEMS----------------------------------MEP 140
+VD+ G+ S D+A+K+ EM + P
Sbjct: 245 SLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 141 DSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVH-VLLSNMYASANQWEDVVKVR 199
+ L ++L+AC G + GR + + S++ + L ++Y E+ + V
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 200 KKMEDK 205
+++ +K
Sbjct: 365 ERLHEK 370
>AT2G03880.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr2:1181560-1183452 FORWARD LENGTH=630 | 201606
Length = 630
Score = 165 bits (418), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 16/205 (7%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
MY KCG +E A +VFN+M ERDV +++MISGLA +G S+ ++LF +M G PN
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN--- 358
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
Y G VL ACS GL+E+G +F+SM ++YGI+ HYGCM+DLL
Sbjct: 359 ----YITIVG---------VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERLAGRSLDSDGVHV 180
G+A LD+A KL++EM EPD+ LL AC + ++ L +++ + G +
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 181 LLSNMYASANQWEDVVKVRKKMEDK 205
LLSN+YA++ +W+ V ++R +M D+
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDR 490
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
++AK G E A VF+EM D + S+I G A + RS +ELF +M G
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG------- 255
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
F +T S VL AC+ + L+E GM ++ + +Q + +VD+
Sbjct: 256 --------FIAEQATLTS-VLRACTGLALLELGM---QAHVHIVKYDQDLILNNALVDMY 303
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERL 168
+ L++A ++ ++M E D +++ +G + ++ ER+
Sbjct: 304 CKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFERM 350
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 1 MYAKCGCIETASQVFNEMSERDVFAFTSMISGLANHGRSKRVIELFIKMGEDGGNPNELL 60
MY K + A Q+F++M +R+V ++T+MIS + ++ +EL + M D PN
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN--- 161
Query: 61 LKPKYFVNFGRHISTFYSLVLSACSRMGLVEEGMRFFKSMNEVYGIEQSIGHYGCMVDLL 120
+ T YS VL +C+ G+ + M + E G+E + ++D+
Sbjct: 162 ------------VYT-YSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVF 204
Query: 121 GRASMLDEAKKLVSEMSMEPDSYVLGALLNACGMHGDVELGREMVERL 168
+ ++A + EM + D+ V +++ + ++ E+ +R+
Sbjct: 205 AKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251