BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3840.1
(189 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 114 2e-29
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 114 2e-29
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 114 bits (285), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 53 GSSPFSWKSKKQHTVAKSFAGAEYRALANLTQELQWLKYLLRDIGIDRSSPMSVHCDNRA 112
G+S SWKSKKQ V+KS A AEYRAL+ T E+ WL R++ + S P + CDN A
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 113 ALHIADNPVFHERTKHIEIDCHFVRERSRQMLLLLVSHQQLTNLRTFSPNLLMPTPSRRY 172
A+HIA N VFHERTKHIE DCH VRERS L S Q F+ L +P R
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQDGFTEYL---SPILRG 584
Query: 173 LASWLLSRFLL 183
+++S F L
Sbjct: 585 TIMYIVSMFGL 595
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 114 bits (285), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 53 GSSPFSWKSKKQHTVAKSFAGAEYRALANLTQELQWLKYLLRDIGIDRSSPMSVHCDNRA 112
G+S SWKSKKQ V+KS A AEYRAL+ T E+ WL R++ + S P + CDN A
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 113 ALHIADNPVFHERTKHIEIDCHFVRERSRQMLLLLVSHQQLTNLRTFSPNLLMPTPSRRY 172
A+HIA N VFHERTKHIE DCH VRERS L S Q F+ L +P R
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQDGFTEYL---SPILRG 584
Query: 173 LASWLLSRFLL 183
+++S F L
Sbjct: 585 TIMYIVSMFGL 595