BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3890.1
(169 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11690.1 | hypothetical protein | Chr3:3695484-3696242 FORWAR... 84 8e-20
AT2G27180.1 | hypothetical protein | Chr2:11620473-11620970 FORW... 76 1e-17
AT5G06380.1 | hypothetical protein | Chr5:1949632-1950072 FORWAR... 68 9e-15
AT1G26140.1 | hypothetical protein | Chr1:9038708-9039540 REVERS... 42 6e-05
>AT3G11690.1 | hypothetical protein | Chr3:3695484-3696242 FORWARD
LENGTH=252 | 201606
Length = 252
Score = 83.6 bits (205), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 27 SSSSSSTRTGKIKFGEIVGGTTAECAAICCCCPCGVMNLLILIMYKLPVGICRK------ 80
SS S G E GGTTA CAA+ CCCPCG++NLL+L +YK+P GICR+
Sbjct: 41 SSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRR 100
Query: 81 --------VLKIRKRRKKKKRKQ-----TQIGVKKCDSFEDDDEIRVHNNNNNISSSSLI 127
+L K +R Q ++ + DS + D+ N + +
Sbjct: 101 RKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSV 160
Query: 128 SDESEEKSDDSLSSKQLMELEEQMWCKFNGAGFWRSPSQR 167
+ + + + ++ LE++MW +F GAGFWRSPSQR
Sbjct: 161 ATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQR 200
>AT2G27180.1 | hypothetical protein | Chr2:11620473-11620970 FORWARD
LENGTH=165 | 201606
Length = 165
Score = 75.9 bits (185), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 16 QSFIQNQSPTSSSSSSSTRTGKIKFGEIVGGTTAECAAICCCCPCGVMNLLILIMYKLPV 75
+S ++N P+++S S R K GE+ GG AECAA+ CCCPC V+NL++L +YK+P
Sbjct: 17 ESTMRNSPPSTTSLSKERR----KVGEVAGGAAAECAAVWCCCPCAVVNLMVLAVYKVPA 72
Query: 76 GICRKVLKIRKRRKKKKRKQTQIGVKKCDSFEDDDEIRVHNNNNNISSSSLISDESEEKS 135
+C+K + KRR+ +++ + + + E VH N ++ I E S
Sbjct: 73 AVCKKAWRRSKRRRFTRKRHGLLA----SATAEGSESTVHARLNEEDLTAEIVFEECHVS 128
Query: 136 DDSLSSKQLMELEEQMWCKFNGAGFWRSPSQRN 168
L+ ++ LE +M +F GAGFWRSPSQ++
Sbjct: 129 GGELN--DVVRLENEMLDRFYGAGFWRSPSQKD 159
>AT5G06380.1 | hypothetical protein | Chr5:1949632-1950072 FORWARD
LENGTH=146 | 201606
Length = 146
Score = 68.2 bits (165), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 25/160 (15%)
Query: 7 NPHPNLDRNQSFIQNQSPTSSSSSSSTRTGKIKFGEIVGGTTAECAAICCCCPCGVMNLL 66
N P+L R+ S +P+ S+T E GGTTA CAA+C C PC V+NL+
Sbjct: 2 NKQPSLRRSLS-----TPSLCGGGSTT-------AECCGGTTASCAALCLCAPCSVVNLV 49
Query: 67 ILIMYKLPVGICRKVLKIRKRRKKKKRKQTQIGVKKCDSFEDDDEIRVHNNNNNISSSSL 126
+L +YKLP G+CR+ ++ +R++ K++ + G + + VH
Sbjct: 50 VLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGREFGRG--GSSQFAVHP---------- 97
Query: 127 ISDESEEKSDDSLSSKQLMELEEQMWCKFNGAGFWRSPSQ 166
+ +E+ ++ + ++ LE++MW +F GFWRS SQ
Sbjct: 98 -LESRDEEEEEEEEDEAVIALEKEMWSRFYSGGFWRSLSQ 136
>AT1G26140.1 | hypothetical protein | Chr1:9038708-9039540 REVERSE
LENGTH=162 | 201606
Length = 162
Score = 41.6 bits (96), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 45 GGTTAECAAICCCCPCGVMNLLILIMYKLPVGICRKVLKIRKRRKKKKRKQTQIGVKK 102
G A+C + CCC C V+ + + I +K+P + +K+ K KR K + T VK+
Sbjct: 50 GAFAADCVVLSCCCQCLVLQVSVFIFFKIPRKLAKKMKKFVKRICGKTLQPTMEDVKE 107