BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4030.1
(806 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 296 3e-86
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 296 3e-86
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 114 4e-28
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 92 2e-21
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 69 8e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 296 bits (757), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/554 (35%), Positives = 287/554 (51%), Gaps = 76/554 (13%)
Query: 237 LQQQQQDVSVHTRPKRLYKPV-------------------QRLGSDK--PLRHYWQTNLV 275
+Q + SVHT +R KP Q L +K PL H + LV
Sbjct: 22 IQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSF---LV 78
Query: 276 EYALSVEDDEPITFKQAITAAERESWLVAIQEEMESLHKNQTWEVVPLPEGKFVIGCKWV 335
A + EP T+ +A E W A+ +E+ ++ TWE+ LP K IGCKWV
Sbjct: 79 CIA---KAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 336 YKKKEDSSEIKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLE 393
YK K +S GT RYKARLVAKGY Q+EG+D+ E FSPV K TS++++L+I A +
Sbjct: 133 YKIKYNS---DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 394 LEQLDVKTAFLHGDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYRLKQSPRQWYKQ 449
L QLD+ AFL+GDL+EEIYM P GY + N VC L+KS+Y LKQ+ RQW+ +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 450 FDFFMLKHSFRRSEYDFCVYIKKLREGDFIYLLLYVDDMLIASRSMVEINKLKSQLSQEF 509
F ++ F +S D Y K+ F+ +L+YVDD++I S + +++LKSQL F
Sbjct: 250 FSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCF 308
Query: 510 EMKDMGAAKKILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQNAKAVSTPLAPHFRLSG 569
+++D+G K LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 309 KLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 570 KQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKW 629
D +D Y +G LMY + TR DIS AV+ +S+F P H +AV
Sbjct: 367 HSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 419
Query: 630 VLRYLKGTV---IRVCALVETHVRVHG-----------------------APVSWRSMLQ 663
+L Y+KGTV + + E ++V + +SW+S Q
Sbjct: 420 ILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQ 479
Query: 664 STVALSTTEAEYMAMAEGVKKALWLWGLLDDLGIK-QECVDVWCDSQSAIHLAKNQVHHA 722
V+ S+ EAEY A++ + +WL +L + + ++CD+ +AIH+A N V H
Sbjct: 480 QVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539
Query: 723 RTKHIDVRYHFVRD 736
RTKHI+ H VR+
Sbjct: 540 RTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 296 bits (757), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/554 (35%), Positives = 287/554 (51%), Gaps = 76/554 (13%)
Query: 237 LQQQQQDVSVHTRPKRLYKPV-------------------QRLGSDK--PLRHYWQTNLV 275
+Q + SVHT +R KP Q L +K PL H + LV
Sbjct: 22 IQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSF---LV 78
Query: 276 EYALSVEDDEPITFKQAITAAERESWLVAIQEEMESLHKNQTWEVVPLPEGKFVIGCKWV 335
A + EP T+ +A E W A+ +E+ ++ TWE+ LP K IGCKWV
Sbjct: 79 CIA---KAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 336 YKKKEDSSEIKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLE 393
YK K +S GT RYKARLVAKGY Q+EG+D+ E FSPV K TS++++L+I A +
Sbjct: 133 YKIKYNS---DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 394 LEQLDVKTAFLHGDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYRLKQSPRQWYKQ 449
L QLD+ AFL+GDL+EEIYM P GY + N VC L+KS+Y LKQ+ RQW+ +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 450 FDFFMLKHSFRRSEYDFCVYIKKLREGDFIYLLLYVDDMLIASRSMVEINKLKSQLSQEF 509
F ++ F +S D Y K+ F+ +L+YVDD++I S + +++LKSQL F
Sbjct: 250 FSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCF 308
Query: 510 EMKDMGAAKKILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQNAKAVSTPLAPHFRLSG 569
+++D+G K LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 309 KLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 570 KQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKW 629
D +D Y +G LMY + TR DIS AV+ +S+F P H +AV
Sbjct: 367 HSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 419
Query: 630 VLRYLKGTV---IRVCALVETHVRVHG-----------------------APVSWRSMLQ 663
+L Y+KGTV + + E ++V + +SW+S Q
Sbjct: 420 ILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQ 479
Query: 664 STVALSTTEAEYMAMAEGVKKALWLWGLLDDLGIK-QECVDVWCDSQSAIHLAKNQVHHA 722
V+ S+ EAEY A++ + +WL +L + + ++CD+ +AIH+A N V H
Sbjct: 480 QVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539
Query: 723 RTKHIDVRYHFVRD 736
RTKHI+ H VR+
Sbjct: 540 RTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 114 bits (284), Expect = 4e-28, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 118/235 (50%), Gaps = 36/235 (15%)
Query: 479 IYLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 538
+YLLLYVDD+L+ S +N L QLS F MKD+G LG++IK S L+L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 539 KGYIERVVSRFGMQNAKAVSTPLAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAM 598
Y E++++ GM + K +STPL L S +T D D + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSD---FRSIVGALQY-L 110
Query: 599 VCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTV-----------IRVCALVE- 646
TRPDIS AV++V + M P ++ +K VLRY+KGT+ + V A +
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 647 -----THVRVHGAP---------VSWRSMLQSTVALSTTEAEYMAMAEGVKKALW 687
T R +SW + Q TV+ S+TE EY A+A + W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 92.4 bits (228), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 276 EYALSVEDDEPITFKQAITAAERESWLVAIQEEMESLHKNQTWEVVPLPEGKFVIGCKWV 335
+Y+L++ K I A + W A+QEE+++L +N+TW +VP P + ++GCKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 336 YKKKEDSSEIKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSI 386
+K K S GT R KARLVAKG+ Q+EG+ + E +SPVV+ +IR +L++
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 69.3 bits (168), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 54 LNRTLLEKARCMRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHVDYGR 113
+NRT++EK R M GL + A++ TA +I+N+ P ++++ +P EVW Y
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 114 LRVFGCTAYYHIKGNKLDNRAKKA 137
LR FGC AY H KL RAKK
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKKG 84