BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4100.1
(100 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16715.1 | protein EMBRYO DEFECTIVE 2247 | Chr5:5485353-54932... 146 5e-42
AT1G14610.1 | valyl-tRNA synthetase / valine-tRNA ligase (VALRS)... 93 3e-23
AT5G49030.3 | tRNA synthetase class I (I%2C L%2C M and V) family... 53 2e-09
AT5G49030.1 | tRNA synthetase class I (I%2C L%2C M and V) family... 53 3e-09
AT5G49030.2 | tRNA synthetase class I (I%2C L%2C M and V) family... 52 5e-09
>AT5G16715.1 | protein EMBRYO DEFECTIVE 2247 | Chr5:5485353-5493229
FORWARD LENGTH=974 | 201606
Length = 974
Score = 146 bits (368), Expect = 5e-42, Method: Composition-based stats.
Identities = 68/84 (80%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 16 DRDREREIYIKWWESQGYFKANPDQDGDAFVISMPPPNVTGSLHMRHAMFVTLEDIMVRY 75
D E +IY KWWESQGYFK N DQ G FVI MPPPNVTGSLHM HAMFVTLEDIMVRY
Sbjct: 74 DFSSEEKIY-KWWESQGYFKPNFDQGGSPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRY 132
Query: 76 NRMKGRPTLWLPGTDHAGIATQVI 99
NRM GRPTLWLPGTDHAGIATQ++
Sbjct: 133 NRMNGRPTLWLPGTDHAGIATQLV 156
>AT1G14610.1 | valyl-tRNA synthetase / valine-tRNA ligase (VALRS) |
Chr1:5008502-5014486 REVERSE LENGTH=1108 | 201606
Length = 1108
Score = 92.8 bits (229), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 24 YIKWWESQGYFKANPDQDGDAFVISMPPPNVTGSLHMRHAMFVTLEDIMVRYNRMKGRPT 83
+ WWE FKA+ FVI +PPPNVTG+LH+ HA+ +ED ++R+ RM G
Sbjct: 149 WYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNA 208
Query: 84 LWLPGTDHAGIATQVI 99
LW+PG DHAGIATQV+
Sbjct: 209 LWVPGVDHAGIATQVV 224
>AT5G49030.3 | tRNA synthetase class I (I%2C L%2C M and V) family
protein | Chr5:19875091-19883251 REVERSE LENGTH=1279 |
201606
Length = 1279
Score = 53.1 bits (126), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 19 REREIYIKWWESQGYFKANPDQDGDAFVISMPPPNVTGSLHMRHAMFVTLEDIMVRYNRM 78
RE E+ W E+Q + + + + +G +F++ PP G LHM HA+ L+DI+ RY +
Sbjct: 308 REPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLL 367
Query: 79 KGRPTLWLPGTDHAGIATQV 98
+ ++PG D G+ ++
Sbjct: 368 QNYKVQYVPGWDCHGLPIEL 387
>AT5G49030.1 | tRNA synthetase class I (I%2C L%2C M and V) family
protein | Chr5:19875091-19882291 REVERSE LENGTH=1093 |
201606
Length = 1093
Score = 52.8 bits (125), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 19 REREIYIKWWESQGYFKANPDQDGDAFVISMPPPNVTGSLHMRHAMFVTLEDIMVRYNRM 78
RE E+ W E+Q + + + + +G +F++ PP G LHM HA+ L+DI+ RY +
Sbjct: 122 REPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLL 181
Query: 79 KGRPTLWLPGTDHAGIATQV 98
+ ++PG D G+ ++
Sbjct: 182 QNYKVQYVPGWDCHGLPIEL 201
>AT5G49030.2 | tRNA synthetase class I (I%2C L%2C M and V) family
protein | Chr5:19876365-19882291 REVERSE LENGTH=955 |
201606
Length = 955
Score = 52.4 bits (124), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 19 REREIYIKWWESQGYFKANPDQDGDAFVISMPPPNVTGSLHMRHAMFVTLEDIMVRYNRM 78
RE E+ W E+Q + + + + +G +F++ PP G LHM HA+ L+DI+ RY +
Sbjct: 122 REPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLL 181
Query: 79 KGRPTLWLPGTDHAGIATQV 98
+ ++PG D G+ ++
Sbjct: 182 QNYKVQYVPGWDCHGLPIEL 201