BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4110.1
(215 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 190 1e-60
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 158 3e-44
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 158 3e-44
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 89 1e-22
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 190 bits (483), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 131/207 (63%), Gaps = 9/207 (4%)
Query: 1 MGTLHYFLGIEVTGSSSSELLLTQNKYTLELLQKAELLESKPMATPIPFGKRLSQADGVL 60
+G +HYFLGI++ + S L L+Q KY ++L A +L+ KPM+TP+P K S
Sbjct: 36 LGPVHYFLGIQI-KTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAK 93
Query: 61 LDDPTHYRSLVGGLQYLTMTRPDIAFGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSG 120
DP+ +RS+VG LQYLT+TRPDI++ VN V Q + EP ++KR+ RY+KGT+ G
Sbjct: 94 YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHG 153
Query: 121 ISIKSGDITSLTAYSDSDWAGCPDSRRSTCGYCVFLGNTLVAWCSKKQPTVARSSTEAEY 180
+ I ++ A+ DSDWAGC +RRST G+C FLG +++W +K+QPTV+RSSTE EY
Sbjct: 154 LYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEY 213
Query: 181 KALA-------SHEASRRPQPQLLQTK 200
+ALA ASR P + T
Sbjct: 214 RALALTAAELTWSSASRSRDPSAMNTN 240
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 158 bits (399), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 1 MGTLHYFLGIEVTGSSSSELLLTQNKYTLELLQKAELLESKPMATPIPFGKRLSQADGVL 60
+G L YFLG+E+ S++ + + Q KY L+LL + LL KP + P+ S G
Sbjct: 313 LGPLKYFLGLEI-ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGD 371
Query: 61 LDDPTHYRSLVGGLQYLTMTRPDIAFGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSG 120
D YR L+G L YL +TR DI+F VN ++QF + PR H Q V +I YIKGT+G G
Sbjct: 372 FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 121 ISIKSGDITSLTAYSDSDWAGCPDSRRSTCGYCVFLGNTLVAWCSKKQPTVARSSTEAEY 180
+ S L +SD+ + C D+RRST GYC+FLG +L++W SKKQ V++SS EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 181 KALA 184
+AL+
Sbjct: 492 RALS 495
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 158 bits (399), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 1 MGTLHYFLGIEVTGSSSSELLLTQNKYTLELLQKAELLESKPMATPIPFGKRLSQADGVL 60
+G L YFLG+E+ S++ + + Q KY L+LL + LL KP + P+ S G
Sbjct: 313 LGPLKYFLGLEI-ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGD 371
Query: 61 LDDPTHYRSLVGGLQYLTMTRPDIAFGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSG 120
D YR L+G L YL +TR DI+F VN ++QF + PR H Q V +I YIKGT+G G
Sbjct: 372 FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 121 ISIKSGDITSLTAYSDSDWAGCPDSRRSTCGYCVFLGNTLVAWCSKKQPTVARSSTEAEY 180
+ S L +SD+ + C D+RRST GYC+FLG +L++W SKKQ V++SS EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 181 KALA 184
+AL+
Sbjct: 492 RALS 495
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 89.0 bits (219), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 76 YLTMTRPDIAFGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSGISIKSGDITSLTAYS 135
YLT+TRPD+ F VN ++QF R +Q V ++ Y+KGT+G G+ + L A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 136 DSDWAGCPDSRRSTCGYC 153
DSDWA CPD+RRS G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79